Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL139089.1-201ENST00000620372 975 ntBASIC3.8□□□□□ -1.8
SLC6A12P48065 AC112484.5-201ENST00000624189 228 ntBASIC3.8□□□□□ -1.8
SLC6A12P48065 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A12P48065 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A12P48065 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A12P48065 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A12P48065 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC6A12P48065 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC6A12P48065 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC6A12P48065 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 MTND4P26-201ENST00000415971 1359 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 RNA5SP515-201ENST00000364570 118 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 RNU6-441P-201ENST00000384545 106 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 SNORA57.1-201ENST00000391227 145 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A12P48065 RSL24D1P4-201ENST00000400938 484 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 SSXP10-201ENST00000402595 565 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 MIR1250-201ENST00000408098 113 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 MIR1193-201ENST00000408109 78 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A12P48065 RPP40P1-201ENST00000426762 456 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 TXNL1P1-201ENST00000429528 554 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 MTND5P25-201ENST00000430499 799 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A12P48065 GTF2IP7-202ENST00000436677 309 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 FGF7P3-201ENST00000454645 303 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 NECAP1P2-201ENST00000455668 727 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC010486.2-201ENST00000505572 483 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC104057.1-201ENST00000515547 497 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 RNU5A-4P-201ENST00000516588 111 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AC090877.1-201ENST00000561418 344 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AGGF1P6-201ENST00000569213 976 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AP001542.2-201ENST00000593141 364 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 AL390816.3-201ENST00000604527 1066 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC6A12P48065 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC6A12P48065 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SLC6A12P48065 AP002001.2-201ENST00000529025 1469 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 AP005901.5-201ENST00000545779 1796 ntBASIC3.79□□□□□ -1.8
SLC6A12P48065 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC6A12P48065 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SLC6A12P48065 MTND5P31-201ENST00000419366 1374 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A12P48065 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A12P48065 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A12P48065 RNA5SP479-201ENST00000364858 117 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 RNU6-619P-201ENST00000365146 108 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A12P48065 RNU6-1226P-201ENST00000384317 107 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 SNORD116-8-201ENST00000384365 95 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 RNU1-13P-201ENST00000384499 162 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.78□□□□□ -1.8
SLC6A12P48065 SFR1P1-201ENST00000403720 688 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A12P48065 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A12P48065 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A12P48065 AC009237.2-201ENST00000421358 284 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC6A12P48065 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC6A12P48065 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC6A12P48065 HSFY6P-201ENST00000445573 403 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 EXTL2P1-201ENST00000446218 416 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 Z99714.1-201ENST00000450463 807 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 ART2BP-201ENST00000453501 499 ntBASIC3.78□□□□□ -1.8
SLC6A12P48065 AC011979.1-201ENST00000472300 483 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms