Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.8□□□□□ -1.8
PSMB4P28070 AC090616.5-202ENST00000582111 297 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 AC112230.1-201ENST00000604342 547 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 IGHV3-29-201ENST00000604817 344 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 AC091946.2-201ENST00000606105 291 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.8□□□□□ -1.8
PSMB4P28070 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 MIR6810-201ENST00000622701 70 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
PSMB4P28070 OR6C71P-202ENST00000641886 1107 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.8□□□□□ -1.8
PSMB4P28070 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PSMB4P28070 CR381670.1-201ENST00000624291 1693 ntBASIC3.8□□□□□ -1.8
PSMB4P28070 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PSMB4P28070 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
PSMB4P28070 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PSMB4P28070 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PSMB4P28070 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PSMB4P28070 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PSMB4P28070 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PSMB4P28070 SNORA72.3-201ENST00000365074 132 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 Y_RNA.472-201ENST00000384322 102 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 MT-TC-201ENST00000387405 66 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.79□□□□□ -1.8
PSMB4P28070 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.79□□□□□ -1.8
PSMB4P28070 RNA5SP239-201ENST00000410218 129 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 HMGB3P20-201ENST00000417997 600 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.79□□□□□ -1.8
PSMB4P28070 RPL7P44-201ENST00000424827 742 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 MTCO2P23-201ENST00000425216 680 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.79□□□□□ -1.8
PSMB4P28070 MOB1AP1-201ENST00000430903 535 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.79□□□□□ -1.8
PSMB4P28070 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 KCTD10P1-201ENST00000434203 625 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PSMB4P28070 SKP1P1-201ENST00000438081 489 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AL645638.1-201ENST00000440519 361 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 SETD6P1-201ENST00000444575 317 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC007327.1-201ENST00000447461 264 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 ZNF886P-201ENST00000450781 723 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
PSMB4P28070 RFC5P1-201ENST00000454419 874 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 FGF7P3-201ENST00000454645 303 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 UBDP1-202ENST00000457888 382 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC022034.3-201ENST00000471393 478 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AP000926.1-201ENST00000479573 241 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 RPL5P23-201ENST00000496040 868 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC092593.2-201ENST00000513866 913 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 RN7SKP116-201ENST00000516902 319 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.79□□□□□ -1.8
PSMB4P28070 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.79□□□□□ -1.8
PSMB4P28070 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.79□□□□□ -1.8
PSMB4P28070 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.79□□□□□ -1.8
PSMB4P28070 AC067959.1-201ENST00000604334 379 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 DPRXP5-201ENST00000604662 539 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC016877.3-201ENST00000606778 504 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.79□□□□□ -1.8
PSMB4P28070 AL157392.4-201ENST00000609756 345 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PSMB4P28070 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
PSMB4P28070 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.79□□□□□ -1.8
PSMB4P28070 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
PSMB4P28070 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PSMB4P28070 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
PSMB4P28070 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PSMB4P28070 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PSMB4P28070 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PSMB4P28070 Y_RNA.25-201ENST00000362528 102 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 RNU4-68P-201ENST00000364314 141 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
PSMB4P28070 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
PSMB4P28070 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PSMB4P28070 RNU6-413P-201ENST00000384115 107 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 SNORA51.6-201ENST00000384151 125 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PSMB4P28070 RPL23AP47-201ENST00000408017 460 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 RN7SKP177-201ENST00000410567 355 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.78□□□□□ -1.8
PSMB4P28070 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
PSMB4P28070 AL513175.2-201ENST00000422071 443 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 AL139247.1-201ENST00000422768 325 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 GTF2IP23-201ENST00000423746 351 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 NANOGP5-201ENST00000424456 877 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 USP9YP31-201ENST00000431405 881 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.78□□□□□ -1.8
PSMB4P28070 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 EEF1A1P39-201ENST00000440791 250 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.78□□□□□ -1.8
PSMB4P28070 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.78□□□□□ -1.8
PSMB4P28070 AC134050.1-201ENST00000495088 933 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 AL139099.1-201ENST00000497398 403 ntBASIC3.78□□□□□ -1.8
PSMB4P28070 OR5H5P-201ENST00000503164 928 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms