| MUC1 | P15941 | AC083865.1-201 | ENST00000636634 | 831 nt | BASIC | 2.93 | □□□□□ -1.94 | | |
| MUC1 | P15941 | APAF1-208 | ENST00000549007 | 3492 nt | TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| MUC1 | P15941 | LPP-220 | ENST00000617246 | 18220 nt | APPRIS P1 TSL 1 (best) BASIC | 2.93 | □□□□□ -1.94 | | |
| MUC1 | P15941 | CNGA1-203 | ENST00000420489 | 2746 nt | APPRIS P3 TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | GNAI3-201 | ENST00000369851 | 27174 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | NBPF20-201 | ENST00000369373 | 18760 nt | APPRIS ALT2 TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RGPD3-202 | ENST00000409886 | 5594 nt | APPRIS P2 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MCF2-202 | ENST00000370573 | 2583 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | CYSLTR2-201 | ENST00000282018 | 4672 nt | APPRIS P1 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RPL39-201 | ENST00000361575 | 401 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MT-CO3-201 | ENST00000362079 | 784 nt | APPRIS P1 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RNA5SP383-201 | ENST00000362934 | 120 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SNORD56.3-201 | ENST00000363507 | 71 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RNU6-317P-201 | ENST00000384031 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RSL24D1P1-201 | ENST00000404972 | 493 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RPL5P18-201 | ENST00000406671 | 891 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL357500.1-201 | ENST00000413004 | 279 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | VTA1P1-201 | ENST00000414044 | 866 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC093578.1-201 | ENST00000415219 | 368 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | ATP2B2-IT2-201 | ENST00000419591 | 507 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL590432.1-201 | ENST00000420071 | 566 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC106873.1-201 | ENST00000420664 | 459 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL590783.1-201 | ENST00000424138 | 456 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | TCEAL3-AS1-201 | ENST00000424887 | 361 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | GOT2P5-201 | ENST00000433995 | 546 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | B3GNT2P1-201 | ENST00000434960 | 952 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MED6P1-201 | ENST00000439659 | 713 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC016903.1-201 | ENST00000444017 | 588 nt | TSL 4 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | ARL5AP2-201 | ENST00000444698 | 533 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL139383.1-203 | ENST00000445227 | 420 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | GAPDHP27-201 | ENST00000447427 | 1020 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | NRG3-AS1-201 | ENST00000448936 | 555 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL358075.1-201 | ENST00000450004 | 649 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC011196.1-201 | ENST00000451816 | 595 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | U3.44-201 | ENST00000458938 | 192 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC092754.2-201 | ENST00000463506 | 460 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | DNAJC12-205 | ENST00000483798 | 769 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | LNCPRESS2-201 | ENST00000502518 | 616 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | IL7R-204 | ENST00000506850 | 1004 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC112206.4-201 | ENST00000515142 | 405 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SNORA67.7-201 | ENST00000516664 | 135 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SNORA70.18-201 | ENST00000516696 | 98 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AP000873.2-206 | ENST00000529811 | 429 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | FBXO3-210 | ENST00000532057 | 918 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | OR5B10P-201 | ENST00000532869 | 642 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | LINC00508-201 | ENST00000538901 | 194 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AP000786.1-201 | ENST00000541092 | 581 nt | TSL 4 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC130462.1-201 | ENST00000548144 | 549 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC091563.1-202 | ENST00000574086 | 522 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC005951.1-201 | ENST00000576706 | 485 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC091488.1-201 | ENST00000604239 | 660 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL136370.1-201 | ENST00000608166 | 691 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC016542.1-201 | ENST00000608259 | 493 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC092636.1-201 | ENST00000608609 | 415 nt | TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC004832.5-201 | ENST00000608677 | 401 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | VN1R9P-201 | ENST00000614184 | 867 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MESTIT1_2.1-201 | ENST00000616328 | 235 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC139769.3-201 | ENST00000618383 | 175 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL109620.1-201 | ENST00000618738 | 1197 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC022149.2-201 | ENST00000621061 | 203 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC006249.1-201 | ENST00000621223 | 471 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC080188.3-201 | ENST00000624842 | 748 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC112200.1-201 | ENST00000625015 | 234 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RBMS3-AS3-202 | ENST00000635847 | 738 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | CCDC158-202 | ENST00000434846 | 1728 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MUC15-205 | ENST00000529533 | 2084 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | CADM2-AS1-201 | ENST00000476021 | 2656 nt | TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | C5orf51-201 | ENST00000381647 | 5241 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC100800.1-201 | ENST00000524252 | 2054 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MGAT4C-211 | ENST00000621808 | 2582 nt | APPRIS P1 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | METTL21EP-201 | ENST00000298105 | 713 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SNORA31-201 | ENST00000362607 | 130 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SNORD56.4-201 | ENST00000363883 | 71 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL031121.1-201 | ENST00000406553 | 254 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | HMGB3P31-201 | ENST00000413333 | 595 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | HMGB3P23-201 | ENST00000414981 | 585 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL365277.2-201 | ENST00000415255 | 551 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | BX664727.1-201 | ENST00000416024 | 466 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | BX842559.1-201 | ENST00000419615 | 532 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC087857.1-201 | ENST00000425894 | 467 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL033504.1-201 | ENST00000427015 | 773 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | LINC01473-202 | ENST00000427108 | 695 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC091286.1-201 | ENST00000431233 | 461 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | MTCO1P43-201 | ENST00000431831 | 488 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RPL39L-202 | ENST00000433055 | 749 nt | APPRIS P1 TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RPL7P29-201 | ENST00000437151 | 728 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | LINC01378-202 | ENST00000437514 | 783 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | HMGN2P20-201 | ENST00000437531 | 273 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AL591721.1-201 | ENST00000439849 | 751 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC064871.1-201 | ENST00000444562 | 427 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC239367.2-201 | ENST00000447309 | 705 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC020719.1-201 | ENST00000448977 | 518 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | NEGR1-IT1-201 | ENST00000453121 | 534 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | SETP6-201 | ENST00000479329 | 568 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC021205.2-201 | ENST00000480069 | 347 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AP000563.1-201 | ENST00000490865 | 758 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC020900.1-201 | ENST00000502568 | 565 nt | TSL 4 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | KCTD9P5-201 | ENST00000504141 | 1170 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | RHOBTB3-204 | ENST00000504179 | 883 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| MUC1 | P15941 | AC118282.1-201 | ENST00000506408 | 765 nt | BASIC | 2.91 | □□□□□ -1.94 | | |