Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC008725.1-201ENST00000605123 2263 ntBASIC3.19□□□□□ -1.9
COL4A1P02462 OR11H5P-202ENST00000641612 1325 ntBASIC3.19□□□□□ -1.9
COL4A1P02462 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COL4A1P02462 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A1P02462 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A1P02462 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A1P02462 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.18□□□□□ -1.9
COL4A1P02462 AL049610.1-201ENST00000423374 372 ntBASIC3.18□□□□□ -1.9
COL4A1P02462 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.18□□□□□ -1.9
COL4A1P02462 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A1P02462 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A1P02462 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
COL4A1P02462 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.18□□□□□ -1.9
COL4A1P02462 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.18□□□□□ -1.9
COL4A1P02462 AC007621.1-201ENST00000604544 437 ntBASIC3.18□□□□□ -1.9
COL4A1P02462 AC112503.1-201ENST00000608436 391 ntBASIC3.18□□□□□ -1.9
COL4A1P02462 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A1P02462 CR381653.2-201ENST00000624041 768 ntBASIC3.18□□□□□ -1.9
COL4A1P02462 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A1P02462 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A1P02462 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A1P02462 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
COL4A1P02462 OR56A5-201ENST00000340110 738 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 AL590004.2-201ENST00000404787 371 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 ATF1P1-201ENST00000406040 927 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 AC105402.1-201ENST00000413336 545 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 RPS20P5-201ENST00000434808 360 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.17□□□□□ -1.9
COL4A1P02462 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.17□□□□□ -1.9
COL4A1P02462 AP001646.1-201ENST00000527936 915 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.17□□□□□ -1.9
COL4A1P02462 PWAR6-201ENST00000552334 4618 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A1P02462 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
COL4A1P02462 AC233981.1-201ENST00000423224 461 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 B3GNT2P1-201ENST00000434960 952 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 HMGB3P8-201ENST00000449709 577 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 RPL23AP15-201ENST00000450202 459 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.17□□□□□ -1.9
COL4A1P02462 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.17□□□□□ -1.9
COL4A1P02462 VWA8P1-201ENST00000510889 176 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.17□□□□□ -1.9
COL4A1P02462 AL137072.1-201ENST00000603444 466 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.17□□□□□ -1.9
COL4A1P02462 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A1P02462 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.16□□□□□ -1.9
COL4A1P02462 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.16□□□□□ -1.9
COL4A1P02462 AP000526.1-201ENST00000603308 1388 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
COL4A1P02462 RPLP0P7-201ENST00000416050 667 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.16□□□□□ -1.9
COL4A1P02462 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 CBX1P4-201ENST00000439415 457 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 AC133134.1-201ENST00000466800 359 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 AL391156.1-201ENST00000554965 554 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 MIR4769-201ENST00000584126 77 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 SNORA35B-201ENST00000607417 129 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A1P02462 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
COL4A1P02462 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A1P02462 AC138915.3-201ENST00000562908 1389 ntBASIC3.16□□□□□ -1.9
COL4A1P02462 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A1P02462 SNORA70E-201ENST00000384492 135 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 RN7SKP192-201ENST00000411291 327 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 RPS12P5-201ENST00000423449 371 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.15□□□□□ -1.9
COL4A1P02462 AL590399.6-201ENST00000446396 307 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 FDX1P2-201ENST00000450769 375 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.15□□□□□ -1.9
COL4A1P02462 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.9
COL4A1P02462 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.15□□□□□ -1.9
COL4A1P02462 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.15□□□□□ -1.9
COL4A1P02462 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL4A1P02462 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL4A1P02462 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL4A1P02462 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A1P02462 AC010095.1-201ENST00000443543 144 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A1P02462 AC005921.1-201ENST00000510589 286 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A1P02462 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A1P02462 OR8L1P-201ENST00000534005 955 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AL358913.1-201ENST00000554342 121 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 SNORD53-201ENST00000579969 78 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A1P02462 CTSLP2-204ENST00000629029 392 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 FRG1DP-201ENST00000635586 771 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A1P02462 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A1P02462 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A1P02462 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A1P02462 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A1P02462 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A1P02462 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A1P02462 AC133473.1-201ENST00000455173 299 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 AC018797.3-201ENST00000513388 1241 ntBASIC3.14□□□□□ -1.91
COL4A1P02462 NPM1P35-201ENST00000533043 868 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms