Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-2O95096 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NKX2-2O95096 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NKX2-2O95096 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.95□□□□□ -1.78
NKX2-2O95096 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.95□□□□□ -1.78
NKX2-2O95096 AL158163.1-201ENST00000603915 1649 ntBASIC3.95□□□□□ -1.78
NKX2-2O95096 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
NKX2-2O95096 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AC027290.2-201ENST00000623210 18662 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NKX2-2O95096 RNU6-500P-201ENST00000362349 107 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RNU6-989P-201ENST00000362756 107 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RNU6-433P-201ENST00000363216 104 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RNU6-553P-201ENST00000364047 96 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 Y_RNA.302-201ENST00000364997 102 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RNA5SP88-201ENST00000365560 109 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RNU6-952P-201ENST00000391164 108 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 MIR1179-201ENST00000408703 91 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 RPL23AP39-201ENST00000415533 405 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC083875.1-201ENST00000419509 405 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-2O95096 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-2O95096 DNAJC19P7-201ENST00000428811 344 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 EZH2P1-201ENST00000431167 291 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 UBE2FP3-201ENST00000436366 524 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-2O95096 MUPP-201ENST00000438111 566 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 CBX1P1-201ENST00000440184 427 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 HSPE1P28-201ENST00000443139 211 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC005297.2-201ENST00000450430 606 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 RPS20P24-201ENST00000457473 361 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC011276.1-201ENST00000469688 323 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RPL31P50-201ENST00000471002 296 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 RN7SL459P-201ENST00000481078 302 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 AC112198.1-201ENST00000505369 1220 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC111000.2-201ENST00000507775 550 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 MTCYBP43-201ENST00000513621 740 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 OR4R3P-201ENST00000525084 838 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 CR383656.6-201ENST00000550518 394 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-2O95096 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.94□□□□□ -1.78
NKX2-2O95096 RN7SL176P-201ENST00000580352 264 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AC008745.1-201ENST00000604064 271 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 MIR432-201ENST00000606207 94 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 AL121873.1-201ENST00000616013 524 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL445264.1-201ENST00000621719 171 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NKX2-2O95096 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NKX2-2O95096 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.94□□□□□ -1.78
NKX2-2O95096 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.94□□□□□ -1.78
NKX2-2O95096 AL022578.1-201ENST00000439330 1433 ntBASIC3.94□□□□□ -1.78
NKX2-2O95096 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NKX2-2O95096 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC010300.1-201ENST00000600671 5134 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 KPNA2P2-201ENST00000419546 1489 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NKX2-2O95096 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.93□□□□□ -1.78
NKX2-2O95096 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NKX2-2O95096 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NKX2-2O95096 RNU6-821P-201ENST00000390995 107 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 U3.22-201ENST00000391120 215 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AL031679.1-201ENST00000400616 525 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.93□□□□□ -1.78
NKX2-2O95096 RNA5SP36-201ENST00000410197 133 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 RPS15AP38-201ENST00000413110 372 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 MTCO2P5-201ENST00000422621 426 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 AC093698.1-201ENST00000423843 571 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 PSMA6P3-201ENST00000428242 164 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.93□□□□□ -1.78
NKX2-2O95096 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms