Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 AC011602.1-201ENST00000546484 331 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
USH2AO75445 Z82209.1-201ENST00000422141 2135 ntBASIC1.25□□□□□ -2.21
USH2AO75445 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 U8.13-201ENST00000390842 128 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AL121882.1-201ENST00000422893 417 ntBASIC1.25□□□□□ -2.21
USH2AO75445 MTCO3P16-201ENST00000454456 754 ntBASIC1.25□□□□□ -2.21
USH2AO75445 RN7SL330P-201ENST00000469709 307 ntBASIC1.25□□□□□ -2.21
USH2AO75445 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.25□□□□□ -2.21
USH2AO75445 AL158062.1-201ENST00000619632 745 ntBASIC1.25□□□□□ -2.21
USH2AO75445 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
USH2AO75445 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 AC008079.2-201ENST00000623543 20396 ntBASIC1.25□□□□□ -2.21
USH2AO75445 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC1.25□□□□□ -2.21
USH2AO75445 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
USH2AO75445 RNU6-661P-201ENST00000362409 107 ntBASIC1.25□□□□□ -2.21
USH2AO75445 RANP7-201ENST00000418085 644 ntBASIC1.25□□□□□ -2.21
USH2AO75445 ARL6IP1P2-201ENST00000431356 563 ntBASIC1.25□□□□□ -2.21
USH2AO75445 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.25□□□□□ -2.21
USH2AO75445 AC126121.1-201ENST00000482313 553 ntBASIC1.25□□□□□ -2.21
USH2AO75445 ACTG1P13-201ENST00000486987 1043 ntBASIC1.25□□□□□ -2.21
USH2AO75445 RPS3AP50-201ENST00000487064 803 ntBASIC1.25□□□□□ -2.21
USH2AO75445 SNORA31.21-201ENST00000517180 77 ntBASIC1.25□□□□□ -2.21
USH2AO75445 RPL7P20-201ENST00000520308 745 ntBASIC1.25□□□□□ -2.21
USH2AO75445 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 AP004372.1-201ENST00000604842 844 ntBASIC1.25□□□□□ -2.21
USH2AO75445 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USH2AO75445 SAGE4P-201ENST00000442271 3381 ntBASIC1.25□□□□□ -2.21
USH2AO75445 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
USH2AO75445 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 NCSTNP1-201ENST00000406229 144 ntBASIC1.24□□□□□ -2.21
USH2AO75445 GSTM3P2-201ENST00000412746 530 ntBASIC1.24□□□□□ -2.21
USH2AO75445 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AC009238.1-201ENST00000442165 424 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AC009237.6-201ENST00000446969 424 ntBASIC1.24□□□□□ -2.21
USH2AO75445 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 AC117522.3-201ENST00000507974 584 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 AC026412.2-201ENST00000512270 1075 ntBASIC1.24□□□□□ -2.21
USH2AO75445 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 GABRG2-229ENST00000641017 3628 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 RNA5SP322-201ENST00000363617 119 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 RPL7P10-201ENST00000417407 739 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 RPL23AP82-202ENST00000427528 469 ntBASIC1.24□□□□□ -2.21
USH2AO75445 MTCO1P52-201ENST00000433928 531 ntBASIC1.24□□□□□ -2.21
USH2AO75445 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.24□□□□□ -2.21
USH2AO75445 CENPBD1P1-201ENST00000464061 469 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AC093663.2-201ENST00000484625 313 ntBASIC1.24□□□□□ -2.21
USH2AO75445 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 AP001317.1-201ENST00000531194 960 ntBASIC1.24□□□□□ -2.21
USH2AO75445 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.24□□□□□ -2.21
USH2AO75445 APOOP1-201ENST00000604695 592 ntBASIC1.24□□□□□ -2.21
USH2AO75445 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 TAB3P1-202ENST00000452645 1634 ntBASIC1.24□□□□□ -2.21
USH2AO75445 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH2AO75445 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
USH2AO75445 MIR26A1-201ENST00000362205 77 ntBASIC1.24□□□□□ -2.21
USH2AO75445 SNORD114-26-201ENST00000363543 72 ntBASIC1.24□□□□□ -2.21
USH2AO75445 AL024474.1-201ENST00000404655 591 ntBASIC1.24□□□□□ -2.21
USH2AO75445 U3.42-201ENST00000408746 214 ntBASIC1.24□□□□□ -2.21
USH2AO75445 PTP4A1P5-201ENST00000420305 455 ntBASIC1.24□□□□□ -2.21
USH2AO75445 DNAJC19P4-201ENST00000440115 345 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms