Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CUX2O14529 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC5.13□□□□□ -1.59
CUX2O14529 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.13□□□□□ -1.59
CUX2O14529 AP000936.2-201ENST00000447151 681 ntBASIC5.13□□□□□ -1.59
CUX2O14529 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 MIR4648-201ENST00000580107 72 ntBASIC5.13□□□□□ -1.59
CUX2O14529 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.13□□□□□ -1.59
CUX2O14529 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.12□□□□□ -1.59
CUX2O14529 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUX2O14529 WWP1P1-201ENST00000466609 2769 ntBASIC5.12□□□□□ -1.59
CUX2O14529 AC007496.3-201ENST00000624987 3443 ntBASIC5.12□□□□□ -1.59
CUX2O14529 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CUX2O14529 AL590290.1-201ENST00000405336 380 ntBASIC5.12□□□□□ -1.59
CUX2O14529 AL590103.1-201ENST00000434488 307 ntBASIC5.12□□□□□ -1.59
CUX2O14529 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.12□□□□□ -1.59
CUX2O14529 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.12□□□□□ -1.59
CUX2O14529 AC146507.2-201ENST00000460608 476 ntBASIC5.12□□□□□ -1.59
CUX2O14529 HMGN1P8-201ENST00000463578 288 ntBASIC5.12□□□□□ -1.59
CUX2O14529 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.12□□□□□ -1.59
CUX2O14529 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.12□□□□□ -1.59
CUX2O14529 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.12□□□□□ -1.59
CUX2O14529 SNORD39.2-201ENST00000579995 76 ntBASIC5.12□□□□□ -1.59
CUX2O14529 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.12□□□□□ -1.59
CUX2O14529 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.12□□□□□ -1.59
CUX2O14529 PISRT1-201ENST00000626175 531 ntBASIC5.12□□□□□ -1.59
CUX2O14529 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CUX2O14529 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CUX2O14529 AC117529.2-201ENST00000512159 2068 ntBASIC5.11□□□□□ -1.59
CUX2O14529 MAPK10-373ENST00000641983 6772 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC004925.1-201ENST00000624256 2706 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC008725.1-201ENST00000605123 2263 ntBASIC5.11□□□□□ -1.59
CUX2O14529 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CUX2O14529 RNU6-386P-201ENST00000362650 107 ntBASIC5.11□□□□□ -1.59
CUX2O14529 RNA5SP68-201ENST00000363885 119 ntBASIC5.11□□□□□ -1.59
CUX2O14529 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CUX2O14529 AL353692.2-201ENST00000407054 335 ntBASIC5.11□□□□□ -1.59
CUX2O14529 RN7SKP223-201ENST00000410582 62 ntBASIC5.11□□□□□ -1.59
CUX2O14529 RNU6-55P-201ENST00000411092 107 ntBASIC5.11□□□□□ -1.59
CUX2O14529 RNU6-954P-201ENST00000411355 107 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC002524.1-201ENST00000411687 547 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.11□□□□□ -1.59
CUX2O14529 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.11□□□□□ -1.59
CUX2O14529 CST9LP2-201ENST00000437612 320 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AP000936.3-201ENST00000438127 255 ntBASIC5.11□□□□□ -1.59
CUX2O14529 Z99127.3-201ENST00000448158 395 ntBASIC5.11□□□□□ -1.59
CUX2O14529 SEPT7P3-201ENST00000455017 621 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC105918.1-201ENST00000474399 838 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC021146.1-201ENST00000511202 716 ntBASIC5.11□□□□□ -1.59
CUX2O14529 MTND2P13-201ENST00000577438 1039 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.11□□□□□ -1.59
CUX2O14529 AP004607.9-201ENST00000618202 316 ntBASIC5.11□□□□□ -1.59
CUX2O14529 AC073869.7-201ENST00000640874 297 ntBASIC5.11□□□□□ -1.59
CUX2O14529 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
CUX2O14529 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CUX2O14529 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 AP003122.5-201ENST00000527668 3766 ntBASIC5.1□□□□□ -1.59
CUX2O14529 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 MIR30E-201ENST00000362104 92 ntBASIC5.1□□□□□ -1.59
CUX2O14529 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 KLHL2P1-201ENST00000508691 521 ntBASIC5.1□□□□□ -1.59
CUX2O14529 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.1□□□□□ -1.59
CUX2O14529 RN7SKP34-201ENST00000516142 244 ntBASIC5.1□□□□□ -1.59
CUX2O14529 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.1□□□□□ -1.59
CUX2O14529 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.1□□□□□ -1.59
CUX2O14529 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.1□□□□□ -1.59
CUX2O14529 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.1□□□□□ -1.59
CUX2O14529 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CUX2O14529 RPS4XP5-202ENST00000449995 1334 ntBASIC5.1□□□□□ -1.59
CUX2O14529 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.1□□□□□ -1.59
CUX2O14529 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CUX2O14529 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUX2O14529 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.09□□□□□ -1.59
CUX2O14529 AL592148.1-201ENST00000413568 445 ntBASIC5.09□□□□□ -1.59
CUX2O14529 RPS12P5-201ENST00000423449 371 ntBASIC5.09□□□□□ -1.59
CUX2O14529 AC112653.1-201ENST00000443851 386 ntBASIC5.09□□□□□ -1.59
CUX2O14529 PRDX3P4-201ENST00000470828 747 ntBASIC5.09□□□□□ -1.59
CUX2O14529 GAPDHP39-201ENST00000481866 979 ntBASIC5.09□□□□□ -1.59
CUX2O14529 AC006445.2-201ENST00000510061 472 ntBASIC5.09□□□□□ -1.59
CUX2O14529 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.09□□□□□ -1.59
CUX2O14529 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.09□□□□□ -1.59
CUX2O14529 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CUX2O14529 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.09□□□□□ -1.59
CUX2O14529 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.09□□□□□ -1.59
CUX2O14529 AC005539.1-201ENST00000443768 1479 ntBASIC5.09□□□□□ -1.59
CUX2O14529 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
CUX2O14529 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CUX2O14529 MIR137-201ENST00000385223 102 ntBASIC5.08□□□□□ -1.6
CUX2O14529 RPS4XP7-201ENST00000406274 780 ntBASIC5.08□□□□□ -1.6
CUX2O14529 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.08□□□□□ -1.6
CUX2O14529 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.08□□□□□ -1.6
CUX2O14529 RPL21P99-201ENST00000480369 423 ntBASIC5.08□□□□□ -1.6
CUX2O14529 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.08□□□□□ -1.6
CUX2O14529 RN7SKP282-201ENST00000516824 299 ntBASIC5.08□□□□□ -1.6
CUX2O14529 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms