Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AP001981.2-201ENST00000603241 418 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC008745.1-201ENST00000604064 271 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC092354.1-201ENST00000606057 376 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC078899.5-201ENST00000612475 178 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC092192.1-201ENST00000633154 1018 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PKP3Q9Y446 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 DDX43P2-201ENST00000604753 1354 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 OR52B1P-201ENST00000316506 909 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 RNU4-24P-201ENST00000364565 139 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 RNU2-21P-201ENST00000410368 188 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL161631.1-201ENST00000417933 486 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC010153.1-201ENST00000432862 727 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL360221.1-201ENST00000445989 335 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PKP3Q9Y446 ABCF2P2-201ENST00000450549 296 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 KATNBL1P6-201ENST00000453433 915 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 RPS15AP17-201ENST00000470598 390 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC109486.1-201ENST00000486833 374 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL024509.2-201ENST00000493462 493 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC114981.1-201ENST00000503897 678 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC090071.1-201ENST00000507713 644 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC006499.2-201ENST00000513470 337 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 Y_RNA.655-201ENST00000515919 96 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC092851.1-201ENST00000535964 478 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC068831.4-201ENST00000556118 109 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 ROCK1P1-201ENST00000573767 549 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 MIR4637-201ENST00000582405 84 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL354984.3-201ENST00000604803 325 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC012557.2-201ENST00000605919 418 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC106028.5-201ENST00000610332 395 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL121873.1-201ENST00000616013 524 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 AC018816.2-201ENST00000621460 353 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 AL356266.1-201ENST00000623311 483 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 MIR7641-1-201ENST00000627518 61 ntBASIC4.31□□□□□ -1.72
PKP3Q9Y446 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.31□□□□□ -1.72
PKP3Q9Y446 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PKP3Q9Y446 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PKP3Q9Y446 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 AC074029.4-201ENST00000624796 1859 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 OR4G11P-202ENST00000642116 1414 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 RNU6-462P-201ENST00000362659 105 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 RNU1-32P-201ENST00000363937 159 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 RNU6-1243P-201ENST00000364028 107 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 RNA5SP509-201ENST00000364577 119 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PKP3Q9Y446 U3.22-201ENST00000391120 215 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 SNORD66.1-201ENST00000391230 76 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 SSXP10-201ENST00000402595 565 ntBASIC4.3□□□□□ -1.72
PKP3Q9Y446 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PKP3Q9Y446 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms