Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC003982.1-202ENST00000469928 248 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AC126121.1-201ENST00000482313 553 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AP002770.2-201ENST00000543613 532 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 SNORD53-201ENST00000579969 78 ntBASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHANK2Q9UPX8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHANK2Q9UPX8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 RNU1-112P-201ENST00000364401 164 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 RPL23AP4-201ENST00000427757 463 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AC104058.1-201ENST00000448028 297 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AC002553.2-201ENST00000453217 340 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AC132942.1-201ENST00000486753 483 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AC022960.2-201ENST00000616300 666 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AP004607.9-201ENST00000618202 316 ntBASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHANK2Q9UPX8 AC134882.1-201ENST00000603738 1676 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AL583834.1-201ENST00000406943 343 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 HMGB3P23-201ENST00000414981 585 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 BX276092.3-201ENST00000424182 230 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AL513043.1-201ENST00000439124 535 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AC090525.1-201ENST00000479116 478 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AC093278.1-201ENST00000494700 600 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AC091515.1-201ENST00000548110 679 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AC012078.1-201ENST00000405035 1646 ntBASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.2□□□□□ -1.74
SHANK2Q9UPX8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 MTCO1P52-201ENST00000433928 531 ntBASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 RNA5SP282-201ENST00000516355 108 ntBASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 AC010338.1-201ENST00000621823 717 ntBASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 TAB3P1-202ENST00000452645 1634 ntBASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHANK2Q9UPX8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 RNU1-87P-201ENST00000363727 170 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 RPL23AP23-201ENST00000452590 471 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 RPS4XP6-201ENST00000477670 797 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC131238.1-201ENST00000617135 328 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC103798.2-201ENST00000624292 632 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AP000936.2-201ENST00000447151 681 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 RN7SL442P-201ENST00000473804 320 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 RN7SKP43-201ENST00000516173 320 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 AC011492.1-201ENST00000600023 315 ntBASIC4.18□□□□□ -1.74
SHANK2Q9UPX8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 MIR3074-201ENST00000384885 81 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 ATP5F1P6-201ENST00000402768 767 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 RN7SKP192-201ENST00000411291 327 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 VN1R48P-201ENST00000448149 1036 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 RPS29P21-201ENST00000496272 170 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 RN7SKP31-201ENST00000516354 278 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms