Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MRPS18CP4-201ENST00000535821 231 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC018552.1-201ENST00000562099 811 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 RN7SL261P-201ENST00000613441 282 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AC073488.3-201ENST00000631611 778 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 THAP12P4-201ENST00000528321 2266 ntBASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TRIM35Q9UPQ4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AP003175.1-201ENST00000641383 6658 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC093909.5-201ENST00000621839 1799 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 Y_RNA.16-201ENST00000362421 102 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 RNU1-76P-201ENST00000362903 159 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 SNORD8-201ENST00000363915 110 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AL096829.1-201ENST00000413677 457 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 RPL30P2-201ENST00000414021 291 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AL353597.2-202ENST00000434901 373 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 FTH1P1-201ENST00000437933 532 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 KRTAP2-5P-201ENST00000446109 396 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 RNU7-167P-201ENST00000459160 62 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 FTH1P8-201ENST00000498161 514 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC020893.1-201ENST00000502452 580 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 RNU6-911P-201ENST00000516523 104 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC126177.3-201ENST00000551839 688 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC092266.1-201ENST00000610958 165 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TRIM35Q9UPQ4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
TRIM35Q9UPQ4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.12
TRIM35Q9UPQ4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC103710.2-202ENST00000641454 2853 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 RNU1-134P-201ENST00000362935 165 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 RNU6-214P-201ENST00000384130 107 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 SNORD115-46-201ENST00000390982 71 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 RNU6-387P-201ENST00000411331 105 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AL645568.3-201ENST00000433683 316 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC110602.1-201ENST00000437414 318 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AL390119.1-201ENST00000440329 312 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 RPL21P89-201ENST00000444021 467 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC068305.1-201ENST00000497406 726 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 RNU6-202P-201ENST00000515998 96 ntBASIC8.02□□□□□ -1.13
TRIM35Q9UPQ4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms