Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AL606834.3-201ENST00000602615 496 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC073387.2-201ENST00000604797 784 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC018754.1-201ENST00000607486 925 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AP004247.3-201ENST00000608682 624 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 RNU4-35P-201ENST00000362588 141 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC017079.2-201ENST00000416102 485 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC119751.4-201ENST00000507498 357 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AL008729.2-201ENST00000606393 473 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC109454.4-201ENST00000623411 649 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 AC090337.1-201ENST00000579651 2074 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 IPO8P1-201ENST00000455509 3109 ntBASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SHROOM4Q9ULL8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 TAF9BP1-201ENST00000396646 746 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 GSTA8P-201ENST00000404253 637 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 RN7SKP97-201ENST00000410966 333 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 HSFY4P-201ENST00000415994 1181 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 ELOCP18-201ENST00000434209 337 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 RPL26P28-201ENST00000451325 435 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 HMGN3P1-201ENST00000453847 193 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 snoU109.3-201ENST00000459477 145 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC010374.2-201ENST00000512933 535 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 HIGD1AP3-201ENST00000515857 278 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 snoZ278.1-201ENST00000517059 112 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 RNU6-1028P-201ENST00000517164 93 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 NDUFS5P6-201ENST00000529136 295 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 MFSD8-233ENST00000641482 4860 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC007685.1-201ENST00000329806 452 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 OR1L1-202ENST00000373686 1083 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 MCTS2P-201ENST00000394552 546 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 SETP15-201ENST00000412724 337 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AL513175.1-201ENST00000431492 780 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC127537.2-201ENST00000439258 465 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 MTATP6P14-201ENST00000455189 673 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC087897.1-201ENST00000550134 156 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AC008687.2-201ENST00000597865 520 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 U4.6-201ENST00000621618 127 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AL596275.2-204ENST00000641628 552 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 AL596275.2-206ENST00000641957 626 ntBASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
SHROOM4Q9ULL8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AL133383.2-201ENST00000622958 2336 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 NACA3P-201ENST00000359690 648 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 USP9YP21-201ENST00000420603 432 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 SFR1P2-201ENST00000421841 730 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 EIF4EP1-201ENST00000422311 642 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 RPL21P10-201ENST00000463521 490 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms