Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 MIR8058-201ENST00000615737 89 ntBASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 PRO1804-201ENST00000623780 2050 ntBASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 AC118273.1-201ENST00000525324 3006 ntBASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 AL136164.4-201ENST00000625013 2135 ntBASIC3.46□□□□□ -1.86
CHRNA9Q9UGM1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 U1.1-201ENST00000384101 164 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 Y_RNA.493-201ENST00000384422 102 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL355615.1-201ENST00000406187 641 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 HSPE1P8-201ENST00000406997 288 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 USP9YP31-201ENST00000431405 881 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC000041.1-201ENST00000439655 175 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 MTCO3P20-201ENST00000454926 688 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC010301.1-201ENST00000473936 355 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 RN7SL132P-201ENST00000478131 296 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL049830.2-201ENST00000480072 201 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL139099.1-201ENST00000497398 403 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 BOLA3P3-201ENST00000505182 232 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 RN7SKP209-201ENST00000516888 304 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL121603.1-201ENST00000553815 142 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 RPAP2P1-201ENST00000603626 1168 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC011468.4-201ENST00000603942 409 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL451086.1-201ENST00000605596 223 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC090912.3-201ENST00000609775 533 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC018926.1-201ENST00000616335 435 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC068831.8-201ENST00000620171 435 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AL354798.1-201ENST00000622505 329 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC109454.4-201ENST00000623411 649 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC026634.1-201ENST00000634369 198 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 MTND2P41-201ENST00000637599 773 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA9Q9UGM1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AL021368.2-201ENST00000606125 5352 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC007256.1-201ENST00000392253 2765 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC244517.1-201ENST00000606030 2086 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 OR4A15-201ENST00000314706 1035 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 SNORD116-23-201ENST00000384645 92 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RPL22P22-201ENST00000395439 379 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC099677.1-201ENST00000420575 175 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 MTCYBP15-201ENST00000433123 1127 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 SETD6P1-201ENST00000444575 317 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 NDUFA5P7-201ENST00000452914 242 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 snoU109.4-201ENST00000458953 143 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC091860.1-201ENST00000505723 432 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 MTCYBP37-201ENST00000510642 1133 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RAC1P2-201ENST00000511164 579 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 RNU1-61P-201ENST00000516107 151 ntBASIC3.44□□□□□ -1.86
CHRNA9Q9UGM1 AC022695.1-201ENST00000522089 237 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms