Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 AC121761.2-201ENST00000617300 689 ntBASIC3.85□□□□□ -1.79
HPS4Q9NQG7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 AC244205.2-202ENST00000635781 342 ntBASIC3.85□□□□□ -1.79
HPS4Q9NQG7 FAM157B-203ENST00000639350 358 ntBASIC3.85□□□□□ -1.79
HPS4Q9NQG7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
HPS4Q9NQG7 SAGE4P-201ENST00000442271 3381 ntBASIC3.85□□□□□ -1.79
HPS4Q9NQG7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HPS4Q9NQG7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC107081.3-201ENST00000612715 2034 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RNA5SP72-201ENST00000364442 117 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RNVU1-14-201ENST00000384770 164 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 MIR218-2-201ENST00000385006 110 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AL355615.1-201ENST00000406187 641 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 KCTD9P3-201ENST00000434597 1169 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RPS3AP12-201ENST00000443616 753 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RPL21P23-201ENST00000446654 460 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 CFTRP1-201ENST00000456646 183 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RNU7-140P-201ENST00000459546 60 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 PRDX3P4-201ENST00000470828 747 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC104629.1-201ENST00000494226 508 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RN7SKP13-201ENST00000515933 244 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RNU6-202P-201ENST00000515998 96 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 RN7SKP277-201ENST00000516895 283 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 EIF5A2P1-201ENST00000564027 460 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC013468.1-201ENST00000608680 598 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC253576.2-201ENST00000618815 580 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AC243312.2-201ENST00000623340 601 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AL121594.5-201ENST00000631724 573 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 AL392088.2-201ENST00000637607 285 ntBASIC3.84□□□□□ -1.79
HPS4Q9NQG7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HPS4Q9NQG7 MTCO1P24-201ENST00000515438 1558 ntBASIC3.84□□□□□ -1.8
HPS4Q9NQG7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HPS4Q9NQG7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HPS4Q9NQG7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 MIR491-201ENST00000384877 84 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 DSTNP4-201ENST00000399472 474 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 EIF5P1-201ENST00000400019 1231 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 RHEBP3-201ENST00000411920 351 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 KRR1P1-201ENST00000419430 803 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 HMGN1P5-201ENST00000448591 263 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC073387.1-201ENST00000453261 709 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC010307.1-201ENST00000467206 836 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC084198.1-201ENST00000477747 402 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AL049830.2-201ENST00000480072 201 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 TMEM248P1-201ENST00000510579 951 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC112198.4-201ENST00000515450 351 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 HIGD1AP6-201ENST00000521833 279 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC006518.2-201ENST00000542513 940 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC007458.1-201ENST00000542812 373 ntBASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.83□□□□□ -1.8
HPS4Q9NQG7 MTCO1P40-201ENST00000574371 625 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms