Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIR6830-201ENST00000636015 70 ntBASIC4.31□□□□□ -1.72
UPF2Q9HAU5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.31□□□□□ -1.72
UPF2Q9HAU5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF2Q9HAU5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF2Q9HAU5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF2Q9HAU5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPF2Q9HAU5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RNU4-28P-201ENST00000364739 141 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 SNORA70C-201ENST00000384538 135 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RPL7P27-201ENST00000403775 720 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RNA5SP31-201ENST00000411144 127 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 MTND4P3-201ENST00000417829 541 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RPS12P23-201ENST00000419579 400 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC245054.1-201ENST00000420944 258 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 OR8F1P-201ENST00000425243 930 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AP000907.1-201ENST00000428428 510 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 MTCYBP11-201ENST00000447254 1109 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 HMGB1P21-201ENST00000502313 581 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 FTH1P24-201ENST00000503502 462 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 BOLA3P3-201ENST00000505182 232 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC008837.1-201ENST00000511513 412 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC104417.1-201ENST00000523974 751 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 OR4A2P-201ENST00000527276 913 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC009097.3-201ENST00000563557 1018 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC113368.1-201ENST00000603736 382 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AC010975.3-201ENST00000618727 978 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 AL357559.1-201ENST00000622228 274 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 U6.107-201ENST00000637108 79 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 BX649567.1-201ENST00000642071 1134 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 OTUD4P1-201ENST00000237841 3067 ntBASIC4.3□□□□□ -1.72
UPF2Q9HAU5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF2Q9HAU5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AL121657.1-201ENST00000327215 531 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 RNU4-51P-201ENST00000364206 140 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MTCO1P56-201ENST00000401674 224 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 RPS3AP37-201ENST00000419176 745 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC245291.1-201ENST00000419501 328 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AL353093.1-201ENST00000441292 436 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MTATP6P26-201ENST00000445926 662 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 HMGB3P21-201ENST00000452483 547 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AL035407.2-201ENST00000454090 378 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 CDC42P1-201ENST00000456658 548 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC021205.2-201ENST00000480069 347 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC026979.1-201ENST00000492525 396 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AL139099.1-201ENST00000497398 403 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC111193.1-201ENST00000504097 155 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC119751.1-201ENST00000513357 765 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 SNORD116-26-201ENST00000516006 96 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC083923.1-201ENST00000523708 376 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AL389895.1-201ENST00000554127 252 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 MIR4512-201ENST00000583257 77 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC015688.2-201ENST00000584523 262 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 ZNF92P3-201ENST00000596594 954 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC008751.2-201ENST00000597885 980 ntBASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.29□□□□□ -1.72
UPF2Q9HAU5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms