Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNF90P1-201ENST00000480493 1951 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 RPL23AP82-202ENST00000427528 469 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AP000949.1-201ENST00000438328 629 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC127537.2-201ENST00000439258 465 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AL671855.1-201ENST00000446875 1203 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC092685.1-201ENST00000447960 1243 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC078817.1-201ENST00000492623 435 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 SNORA76.2-201ENST00000517095 137 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 IGKV2-23-201ENST00000518729 323 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 OR4R2P-201ENST00000530815 597 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 POLR2KP1-201ENST00000553226 168 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LLPHP1-201ENST00000603571 367 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC105429.2-201ENST00000610567 517 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 MIR1264-201ENST00000616374 69 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 AC090617.9-201ENST00000623751 147 ntBASIC3.55□□□□□ -1.84
NXF3Q9H4D5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NXF3Q9H4D5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RNA5SP229-201ENST00000410809 99 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC127526.1-201ENST00000417526 366 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL353678.1-201ENST00000422735 741 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC109925.1-201ENST00000478069 331 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC006445.1-201ENST00000491925 405 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RPL30P11-201ENST00000495304 339 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RPL5P23-201ENST00000496040 868 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC023141.12-201ENST00000512399 199 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 IGKV2-36-201ENST00000519999 223 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 MTND1P36-201ENST00000522384 936 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC004923.2-201ENST00000529649 369 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC093014.1-201ENST00000548926 724 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 CR383656.14-201ENST00000551951 406 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 ZNF92P2-201ENST00000600543 1059 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RNA5SP108-201ENST00000605921 117 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AL157817.1-201ENST00000614264 790 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 SNORD39.4-201ENST00000620099 78 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AP002371.2-201ENST00000624450 503 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
NXF3Q9H4D5 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
NXF3Q9H4D5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 GABPAP-201ENST00000419271 1356 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 TAF9BP2-201ENST00000400856 499 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 GSTA8P-201ENST00000404253 637 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 RNU4-47P-201ENST00000410876 114 ntBASIC3.53□□□□□ -1.84
NXF3Q9H4D5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.53□□□□□ -1.84
NXF3Q9H4D5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms