Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 VN1R79P-201ENST00000593540 513 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 AL450489.1-201ENST00000612071 468 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 AC064859.1-201ENST00000624741 174 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
SCAPERQ9BY12 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCAPERQ9BY12 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 RNA5SP68-201ENST00000363885 119 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 FAR1P1-201ENST00000427163 934 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 FTH1P6-201ENST00000430768 320 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AL162389.1-201ENST00000449233 177 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AP000916.1-201ENST00000533869 835 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AL389895.1-201ENST00000554127 252 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 MTND5P24-201ENST00000438892 1767 ntBASIC4.3□□□□□ -1.72
SCAPERQ9BY12 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.3□□□□□ -1.72
SCAPERQ9BY12 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AL583834.1-201ENST00000406943 343 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 RPS20P5-201ENST00000434808 360 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 RPS27P29-201ENST00000463110 252 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AP002884.2-201ENST00000471647 395 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 RNA5SP217-201ENST00000515959 91 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AC019080.5-201ENST00000624891 757 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 RPL7P26-201ENST00000333817 754 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 MTCO3P31-201ENST00000405526 789 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 U3.42-201ENST00000408746 214 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 ZYG11AP1-201ENST00000430329 837 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 ST13P14-201ENST00000474095 734 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SCAPERQ9BY12 AL591516.1-201ENST00000611326 274 ntBASIC4.29□□□□□ -1.72
SCAPERQ9BY12 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 RN7SKP44-201ENST00000363602 316 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 U3.11-201ENST00000364476 212 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 OR2AS1P-201ENST00000427827 319 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 AC109329.2-201ENST00000519658 482 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 AC007424.1-203ENST00000554613 687 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 VN1R78P-201ENST00000597393 564 ntBASIC4.28□□□□□ -1.72
SCAPERQ9BY12 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.28□□□□□ -1.72
SCAPERQ9BY12 EXOC5P1-201ENST00000510543 1969 ntBASIC4.27□□□□□ -1.73
SCAPERQ9BY12 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 snoU13.26-201ENST00000459452 105 ntBASIC4.27□□□□□ -1.73
SCAPERQ9BY12 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 AC117522.3-201ENST00000507974 584 ntBASIC4.27□□□□□ -1.73
SCAPERQ9BY12 RNA5SP148-201ENST00000516527 94 ntBASIC4.27□□□□□ -1.73
SCAPERQ9BY12 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 MIR4524B-201ENST00000581569 115 ntBASIC4.27□□□□□ -1.73
SCAPERQ9BY12 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCAPERQ9BY12 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 SNORA3.2-201ENST00000408221 125 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 AC009963.1-201ENST00000417265 157 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 AC013470.3-201ENST00000420252 1194 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 RPS15AP6-201ENST00000420703 385 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 AC003685.2-201ENST00000422795 395 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 ANXA2P1-201ENST00000505539 926 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 SNORD53-201ENST00000579969 78 ntBASIC4.26□□□□□ -1.73
SCAPERQ9BY12 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.26□□□□□ -1.73
SCAPERQ9BY12 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 MIR137-201ENST00000385223 102 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AL139039.1-201ENST00000401900 692 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC105402.1-201ENST00000413336 545 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 SMC4P1-201ENST00000414479 527 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC233981.1-201ENST00000423224 461 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AP000893.1-201ENST00000474462 794 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 RNA5SP380-201ENST00000517190 98 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC007954.1-201ENST00000554198 494 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.25□□□□□ -1.73
SCAPERQ9BY12 AC027176.1-201ENST00000560204 514 ntBASIC4.25□□□□□ -1.73
SCAPERQ9BY12 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms