Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 RNU6-178P-201ENST00000384631 104 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 SNORA46-201ENST00000384762 135 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 AL583834.1-201ENST00000406943 343 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 RPL32P35-201ENST00000415214 394 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 B3GNT2P1-201ENST00000434960 952 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 TXNP1-201ENST00000441872 371 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 EXTL2P1-201ENST00000446218 416 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 NIPA2P2-201ENST00000496376 1083 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC021146.5-201ENST00000503544 545 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 TXNP6-201ENST00000510190 310 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC7Q96M83 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 AL355802.4-201ENST00000607635 548 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC003001.2-201ENST00000616294 831 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 uc_338.9-201ENST00000617424 182 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC7Q96M83 AC107027.3-201ENST00000565095 3473 ntBASIC4.3□□□□□ -1.72
CCDC7Q96M83 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC7Q96M83 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC7Q96M83 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC7Q96M83 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 HSPD1P16-201ENST00000402302 394 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC7Q96M83 AL160175.1-201ENST00000428124 247 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 ZFAND6P1-201ENST00000434138 605 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 AC018797.3-201ENST00000513388 1241 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 AL049870.4-201ENST00000555741 486 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 AC123786.2-201ENST00000603459 275 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 AC107308.1-201ENST00000615897 301 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 MIR7153-201ENST00000637758 57 ntBASIC4.29□□□□□ -1.72
CCDC7Q96M83 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC7Q96M83 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC7Q96M83 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC7Q96M83 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC7Q96M83 AL589826.1-201ENST00000340697 249 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 NACA3P-201ENST00000359690 648 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 MIR148B-201ENST00000362252 99 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AL353692.2-201ENST00000407054 335 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 FAM204CP-201ENST00000424489 642 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 XKRY2-201ENST00000442362 1093 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 MTND5P8-201ENST00000449817 1083 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 RPS27P29-201ENST00000463110 252 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC107398.1-201ENST00000486904 505 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC245166.1-201ENST00000521012 253 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 AL118556.2-201ENST00000614375 824 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC011472.4-201ENST00000615848 491 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AL137790.1-201ENST00000634283 177 ntBASIC4.28□□□□□ -1.72
CCDC7Q96M83 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC7Q96M83 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC7Q96M83 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC7Q96M83 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC7Q96M83 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 OR1S2-201ENST00000302592 978 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 ARF4P3-201ENST00000397387 509 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL691517.1-201ENST00000440833 1235 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC005002.1-201ENST00000447458 540 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 RNU6-1218P-201ENST00000458990 108 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 PRDX3P4-201ENST00000470828 747 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 S100A11P1-201ENST00000477525 312 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC004924.1-201ENST00000480160 781 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC010627.1-201ENST00000503819 1294 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 RNU6-1004P-201ENST00000516584 111 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC027309.2-201ENST00000520566 192 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC7Q96M83 AC090525.3-201ENST00000605601 189 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL096803.3-201ENST00000609032 532 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL162574.2-201ENST00000614618 657 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL354696.1-201ENST00000614652 497 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 MIR622-201ENST00000638396 96 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 AL450326.2-201ENST00000421913 1962 ntBASIC4.27□□□□□ -1.73
CCDC7Q96M83 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms