Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC119403.2-201ENST00000590960 598 ntBASIC6.73□□□□□ -1.33
TRIM47Q96LD4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 MIR8080-201ENST00000622224 89 ntBASIC6.73□□□□□ -1.33
TRIM47Q96LD4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 AP000547.3-204ENST00000588548 2523 ntBASIC6.73□□□□□ -1.33
TRIM47Q96LD4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM47Q96LD4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC016583.1-201ENST00000624221 2431 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC105074.1-201ENST00000623380 3095 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RNU6-492P-201ENST00000363035 104 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 SNORD1C-201ENST00000363315 78 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RNU4-66P-201ENST00000365199 138 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RNU6-169P-201ENST00000365336 107 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 MIR550A3-201ENST00000390735 95 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 PCNPP3-201ENST00000393579 471 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RN7SKP266-201ENST00000410232 287 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL139396.1-201ENST00000421137 167 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 SKA2P1-201ENST00000425592 390 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL590762.4-201ENST00000425885 253 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 MTCO3P29-201ENST00000432119 779 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RPL21P2-201ENST00000440049 481 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC092647.2-201ENST00000452998 253 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RNU6-1334P-201ENST00000516032 105 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RNA5SP135-201ENST00000517019 125 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RN7SKP92-201ENST00000517266 244 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL031176.1-201ENST00000604554 466 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 IGHV3-29-201ENST00000604817 344 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL021879.1-201ENST00000611756 288 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL139099.4-201ENST00000614802 114 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC068870.2-201ENST00000620635 389 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AC010149.2-201ENST00000637608 315 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL732372.2-225ENST00000642124 456 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 OR11H5P-202ENST00000641612 1325 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 AL049555.1-201ENST00000562834 1933 ntBASIC6.72□□□□□ -1.33
TRIM47Q96LD4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TRIM47Q96LD4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TRIM47Q96LD4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM47Q96LD4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.71□□□□□ -1.33
TRIM47Q96LD4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TRIM47Q96LD4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RNA5SP234-201ENST00000363916 119 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 U3.12-201ENST00000364498 214 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC092651.1-201ENST00000426110 312 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AL353093.1-201ENST00000441292 436 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 SLC25A18P1-201ENST00000449385 454 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 FRG2FP-204ENST00000453982 852 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RPL35AP28-201ENST00000459730 331 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 GMFBP1-201ENST00000467831 427 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC126389.1-201ENST00000477436 290 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 TRBVA-201ENST00000498804 316 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 RNU6-1308P-201ENST00000516817 103 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 IGHV3-76-201ENST00000522465 295 ntBASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.71□□□□□ -1.34
TRIM47Q96LD4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms