Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ASNSP1-201ENST00000518311 1939 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC096644.4-201ENST00000563417 2912 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 SNORA9.2-201ENST00000365361 133 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RNU6-532P-201ENST00000384318 107 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RNA5SP274-201ENST00000410484 108 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.14□□□□□ -1.75
USP47Q96K76 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC048351.1-201ENST00000420064 602 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP47Q96K76 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP47Q96K76 MTCO3P21-201ENST00000430791 643 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL353597.2-202ENST00000434901 373 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC093156.1-201ENST00000440382 670 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL353898.1-201ENST00000444055 238 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 RPS27P29-201ENST00000463110 252 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC021146.5-201ENST00000503544 545 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.14□□□□□ -1.75
USP47Q96K76 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP47Q96K76 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.14□□□□□ -1.75
USP47Q96K76 MIR3162-201ENST00000581818 82 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 PSMA6P4-201ENST00000603247 718 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC090953.1-201ENST00000604305 1092 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 AC013412.1-201ENST00000610687 192 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.14□□□□□ -1.75
USP47Q96K76 GABRG2-229ENST00000641017 3628 ntBASIC4.14□□□□□ -1.75
USP47Q96K76 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.13□□□□□ -1.75
USP47Q96K76 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USP47Q96K76 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.13□□□□□ -1.75
USP47Q96K76 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 SNORA48.8-201ENST00000391324 134 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 RPL21P3-201ENST00000395517 478 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 GSTA12P-201ENST00000402398 508 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.13□□□□□ -1.75
USP47Q96K76 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.13□□□□□ -1.75
USP47Q96K76 AC146507.2-201ENST00000460608 476 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.13□□□□□ -1.75
USP47Q96K76 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.13□□□□□ -1.75
USP47Q96K76 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP47Q96K76 OR4V1P-201ENST00000525394 1140 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 TRAV11-201ENST00000539512 339 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 AL391834.1-201ENST00000609609 560 ntBASIC4.13□□□□□ -1.75
USP47Q96K76 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.13□□□□□ -1.75
USP47Q96K76 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.13□□□□□ -1.75
USP47Q96K76 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USP47Q96K76 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP47Q96K76 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP47Q96K76 RNU6-819P-201ENST00000364116 107 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 RNU6-304P-201ENST00000364855 107 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 SNORA70E-201ENST00000384492 135 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.12□□□□□ -1.75
USP47Q96K76 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.12□□□□□ -1.75
USP47Q96K76 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
USP47Q96K76 RNU6-1218P-201ENST00000458990 108 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 AC021146.7-201ENST00000509604 775 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 AC091826.1-201ENST00000514065 313 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 GTF3AP2-201ENST00000557014 266 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.12□□□□□ -1.75
USP47Q96K76 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.12□□□□□ -1.75
USP47Q96K76 AC022509.4-201ENST00000621404 572 ntBASIC4.12□□□□□ -1.75
USP47Q96K76 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP47Q96K76 AC000403.1-201ENST00000613696 3585 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
USP47Q96K76 OR5J1P-201ENST00000313544 939 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 MIR320B1-201ENST00000390209 79 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.11□□□□□ -1.75
USP47Q96K76 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.11□□□□□ -1.75
USP47Q96K76 AC007563.3-201ENST00000433233 371 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.11□□□□□ -1.75
USP47Q96K76 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.11□□□□□ -1.75
USP47Q96K76 HMGB3P8-201ENST00000449709 577 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 KCTD9P5-201ENST00000504141 1170 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 AC021087.2-201ENST00000504656 1203 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.11□□□□□ -1.75
USP47Q96K76 AL390838.2-201ENST00000602394 274 ntBASIC4.11□□□□□ -1.75
USP47Q96K76 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
USP47Q96K76 AL672296.1-201ENST00000427780 2158 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
USP47Q96K76 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
USP47Q96K76 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
USP47Q96K76 ZNF90P1-201ENST00000480493 1951 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP47Q96K76 RPL31P1-201ENST00000398116 372 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 RN7SKP58-201ENST00000411010 305 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.1□□□□□ -1.75
USP47Q96K76 EEF1A1P41-201ENST00000414667 207 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AC092013.1-201ENST00000438795 332 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AC000041.1-201ENST00000439655 175 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 XKRYP6-201ENST00000440468 1116 ntBASIC4.1□□□□□ -1.75
USP47Q96K76 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms