Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 PRELID3BP5-201ENST00000508612 460 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC021146.1-201ENST00000511202 716 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 RNU6-27P-201ENST00000516146 107 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC027309.2-201ENST00000520566 192 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 CYCSP29-201ENST00000533731 318 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC010198.2-201ENST00000550612 259 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AL163153.1-201ENST00000554223 283 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 AP001029.3-201ENST00000588063 596 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC011492.1-201ENST00000600023 315 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AL451086.1-201ENST00000605596 223 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC091946.2-201ENST00000606105 291 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AL355810.1-201ENST00000614629 552 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 MIR8059-201ENST00000620427 81 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AL360181.4-201ENST00000621752 134 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 AC091925.2-201ENST00000625059 256 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 OR52H1-202ENST00000641796 1061 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.96□□□□□ -1.78
VMP1Q96GC9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.78
VMP1Q96GC9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VMP1Q96GC9 MTCO1P23-201ENST00000415223 1526 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 RNU6-657P-201ENST00000383904 107 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 SNORA70C-201ENST00000384538 135 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 SNORD66.1-201ENST00000391230 76 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 RPS26P8-201ENST00000393490 348 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 MIR1179-201ENST00000408703 91 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 RN7SKP182-201ENST00000410772 298 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC092447.6-201ENST00000414578 210 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AL161631.1-201ENST00000417933 486 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 PTP4A1P7-201ENST00000423476 514 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC012497.1-201ENST00000429392 575 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 ATP5HP2-201ENST00000433885 485 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 PTGES3P1-201ENST00000439531 483 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 MTCYBP42-201ENST00000444653 1130 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 SSXP4-201ENST00000451349 245 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC096751.1-202ENST00000502691 1067 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC008427.1-201ENST00000503102 655 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC006390.1-201ENST00000508068 283 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AP001189.2-201ENST00000527320 189 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 NDUFS5P6-201ENST00000529136 295 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC018630.1-201ENST00000541376 925 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC104072.1-201ENST00000568817 668 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC012669.1-201ENST00000603209 283 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AL161729.3-201ENST00000603533 673 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 AL035411.2-201ENST00000604022 421 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 AC007275.1-201ENST00000621243 671 ntBASIC3.95□□□□□ -1.78
VMP1Q96GC9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
VMP1Q96GC9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VMP1Q96GC9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms