Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.51□□□□□ -1.69
TOPBP1Q92547 AP006437.1-201ENST00000641440 3685 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TOPBP1Q92547 FAM133CP-201ENST00000332869 704 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 RNA5SP425-201ENST00000410336 112 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AL590103.1-201ENST00000434488 307 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 KLHL2P1-201ENST00000508691 521 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 RN7SKP60-201ENST00000516985 239 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TOPBP1Q92547 MIR4648-201ENST00000580107 72 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC025811.1-201ENST00000604312 472 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC025754.2-201ENST00000606491 432 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 AC009039.2-201ENST00000624524 529 ntBASIC4.5□□□□□ -1.69
TOPBP1Q92547 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
TOPBP1Q92547 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.49□□□□□ -1.69
TOPBP1Q92547 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC022031.1-201ENST00000585985 2593 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOPBP1Q92547 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOPBP1Q92547 SKINT1L-201ENST00000401057 817 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 MTCO1P51-201ENST00000427672 1060 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 HMGB1P18-201ENST00000438801 619 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 RPL23AP31-201ENST00000456160 467 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC093663.2-201ENST00000484625 313 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC021146.1-201ENST00000511202 716 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.49□□□□□ -1.69
TOPBP1Q92547 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TOPBP1Q92547 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC141257.3-201ENST00000572906 215 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC022069.1-201ENST00000582910 658 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 AC241377.1-201ENST00000619797 406 ntBASIC4.49□□□□□ -1.69
TOPBP1Q92547 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOPBP1Q92547 MIR26A1-201ENST00000362205 77 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 AL590290.1-201ENST00000405336 380 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 RNU4-53P-201ENST00000410828 140 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 OR51A3P-201ENST00000413596 924 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.48□□□□□ -1.69
TOPBP1Q92547 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TOPBP1Q92547 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.48□□□□□ -1.69
TOPBP1Q92547 AL392112.1-201ENST00000605115 829 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.48□□□□□ -1.69
TOPBP1Q92547 AL353684.1-201ENST00000622677 1120 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOPBP1Q92547 AC027287.1-201ENST00000553115 1453 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 AC006020.1-201ENST00000420179 1854 ntBASIC4.48□□□□□ -1.69
TOPBP1Q92547 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TOPBP1Q92547 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.47□□□□□ -1.69
TOPBP1Q92547 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TOPBP1Q92547 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
TOPBP1Q92547 SNORD62.1-201ENST00000362541 86 ntBASIC4.47□□□□□ -1.69
TOPBP1Q92547 U3.6-201ENST00000363622 211 ntBASIC4.47□□□□□ -1.69
TOPBP1Q92547 AL591806.2-201ENST00000433122 173 ntBASIC4.47□□□□□ -1.69
TOPBP1Q92547 HMGN2P3-201ENST00000433603 273 ntBASIC4.47□□□□□ -1.69
TOPBP1Q92547 HMGN2P5-201ENST00000436882 273 ntBASIC4.47□□□□□ -1.69
TOPBP1Q92547 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.47□□□□□ -1.69
TOPBP1Q92547 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.47□□□□□ -1.69
TOPBP1Q92547 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.47□□□□□ -1.69
TOPBP1Q92547 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TOPBP1Q92547 U3.11-201ENST00000364476 212 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TOPBP1Q92547 RPS3AP26-201ENST00000398259 784 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.46□□□□□ -1.69
TOPBP1Q92547 GTF2IP23-201ENST00000423746 351 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC010468.1-201ENST00000461022 817 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.46□□□□□ -1.69
TOPBP1Q92547 AL365503.1-201ENST00000605247 905 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AL354950.1-201ENST00000614150 568 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC079228.1-201ENST00000624774 1049 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 AC099654.11-201ENST00000638857 294 ntBASIC4.46□□□□□ -1.69
TOPBP1Q92547 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.46□□□□□ -1.69
TOPBP1Q92547 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TOPBP1Q92547 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TOPBP1Q92547 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.46□□□□□ -1.7
TOPBP1Q92547 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.46□□□□□ -1.7
TOPBP1Q92547 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.46□□□□□ -1.7
TOPBP1Q92547 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOPBP1Q92547 RPS4XP6-201ENST00000477670 797 ntBASIC4.46□□□□□ -1.7
TOPBP1Q92547 RN7SKP244-201ENST00000516513 307 ntBASIC4.46□□□□□ -1.7
TOPBP1Q92547 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.46□□□□□ -1.7
TOPBP1Q92547 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
TOPBP1Q92547 DDX18P3-201ENST00000404856 2007 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 AC107081.3-201ENST00000612715 2034 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOPBP1Q92547 AP000526.1-201ENST00000603308 1388 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms