Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RNA5SP130-201ENST00000364431 114 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RPL32P23-201ENST00000397237 405 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC097374.1-203ENST00000400783 485 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 MRPS36P1-201ENST00000421291 307 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL365203.2-201ENST00000423444 196 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RBMY1KP-201ENST00000423480 476 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 NPM1P24-201ENST00000428039 894 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 USP9YP31-201ENST00000431405 881 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 SEPT7P5-201ENST00000434048 306 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC007389.2-201ENST00000434630 306 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL117351.1-201ENST00000438864 766 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RAB11AP1-201ENST00000442978 646 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RPS27AP8-201ENST00000452665 445 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RNA5SP246-201ENST00000458909 119 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RPL38P1-201ENST00000460914 211 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RN7SL585P-201ENST00000470538 280 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 S100A11P1-201ENST00000477525 312 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC108734.3-201ENST00000481241 1165 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC110792.1-201ENST00000491826 472 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC108145.1-201ENST00000503770 153 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC108064.1-201ENST00000513791 460 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 RNU6-885P-201ENST00000516607 104 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC087808.1-201ENST00000520501 361 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AP001317.1-201ENST00000531194 960 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC005832.3-201ENST00000537929 631 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 ELOCP32-201ENST00000548625 324 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RN7SL600P-201ENST00000581811 299 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 MIR4512-201ENST00000583257 77 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 VN1R90P-201ENST00000595717 726 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL390816.3-201ENST00000604527 1066 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC106791.2-201ENST00000604680 391 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL445363.3-201ENST00000623080 671 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 CDRT1-208ENST00000630868 794 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC068620.4-201ENST00000636730 1182 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 OR8B1P-202ENST00000641132 1178 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC046144.1-201ENST00000478559 1853 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL122126.1-201ENST00000546905 1318 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM9SF4Q92544 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.89□□□□□ -1.79
TM9SF4Q92544 AL031985.3-201ENST00000565390 2449 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 AC096656.1-201ENST00000623826 1364 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 LINC02471-203ENST00000641941 4752 ntBASIC3.89□□□□□ -1.79
TM9SF4Q92544 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 RLIMP1-201ENST00000339626 1680 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AC093908.1-201ENST00000623125 8092 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 Y_RNA.318-201ENST00000365131 97 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 MIR23A-201ENST00000385245 73 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL590084.2-201ENST00000401481 382 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 OR8F1P-201ENST00000425243 930 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 YWHAZP7-201ENST00000436906 631 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 RPL7P28-201ENST00000437739 740 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 USP9YP22-201ENST00000438971 294 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 THAP5P1-201ENST00000439089 262 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM9SF4Q92544 MTND2P4-201ENST00000445034 1004 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 RPL7P59-201ENST00000447700 943 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.88□□□□□ -1.79
TM9SF4Q92544 HMGB3P22-202ENST00000451823 572 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL109741.2-201ENST00000455561 343 ntBASIC3.88□□□□□ -1.79
TM9SF4Q92544 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms