Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RN7SL356P-201ENST00000582228 248 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 RPL26P30-202ENST00000602923 645 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 CYP4F35P-202ENST00000636121 390 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL353796.1-201ENST00000561542 3241 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 AL355488.2-201ENST00000609909 2850 ntBASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEDD1Q8NHV4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 LINC00561-201ENST00000565815 2738 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RNU5E-1-201ENST00000362477 120 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.100-201ENST00000363141 102 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RNU6-770P-201ENST00000363929 105 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.455-201ENST00000384230 98 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RNU6-1109P-201ENST00000391187 107 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RN7SKP158-201ENST00000410453 326 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 BOLA3P4-201ENST00000418151 400 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 ERLEC1P1-201ENST00000433806 578 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 HMGB3P10-201ENST00000434734 572 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 NDUFB4P8-201ENST00000435351 367 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RPS11P7-201ENST00000442125 465 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RPL30P15-201ENST00000457129 321 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.653-201ENST00000459091 95 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RN7SL515P-201ENST00000463999 297 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RPL5P30-201ENST00000465511 891 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC017015.1-201ENST00000477387 286 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC058823.1-201ENST00000485315 474 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC013356.1-201ENST00000489027 564 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC106872.3-201ENST00000495104 446 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 SCARNA20.4-201ENST00000516969 131 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 RNU6-1220P-201ENST00000517126 108 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC096772.1-201ENST00000609146 564 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC126915.2-201ENST00000610957 190 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC018445.2-201ENST00000622987 260 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC000095.2-202ENST00000637415 154 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 CDC27P3-201ENST00000635418 1910 ntBASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEDD1Q8NHV4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 ASNSP3-201ENST00000451989 1306 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC100757.1-201ENST00000616872 1835 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 Y_RNA.364-201ENST00000365532 101 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 PPIAP9-201ENST00000403866 498 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 SPTLC1P2-201ENST00000407089 121 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 MTCO3P19-201ENST00000415864 321 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 DPH3P2-201ENST00000422618 250 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AL606753.1-201ENST00000427435 87 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 HMGB1P9-201ENST00000429856 646 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 FABP7P2-201ENST00000429946 379 ntBASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.3□□□□□ -1.4
NEDD1Q8NHV4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms