Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 RN7SKP82-201ENST00000516786 223 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 AC007536.1-201ENST00000533382 349 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 AC008083.2-201ENST00000546707 476 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 RPL21P12-201ENST00000559810 515 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 AC069304.3-201ENST00000603938 1084 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 AC055764.2-201ENST00000610089 670 ntBASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC112Q8NEF3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RNA5SP274-201ENST00000410484 108 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC097713.2-201ENST00000430199 356 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AL353705.1-201ENST00000433468 480 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 ELOCP23-201ENST00000452014 332 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RPL5P13-201ENST00000462840 709 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC092754.2-201ENST00000463506 460 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RN7SL807P-201ENST00000470923 297 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC025518.1-201ENST00000479856 347 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC073522.1-201ENST00000483312 377 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC005921.1-201ENST00000510589 286 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC093014.1-201ENST00000548926 724 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC010198.2-201ENST00000550612 259 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 MIR5186-201ENST00000577504 120 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 MTCO2P22-201ENST00000603246 681 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 RNA5SP108-201ENST00000605921 117 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AL442067.2-201ENST00000614033 363 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 LRRC77P-213ENST00000637727 880 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC118273.1-201ENST00000525324 3006 ntBASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC112Q8NEF3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 TAF9BP1-201ENST00000396646 746 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 OR1AA1P-201ENST00000419597 916 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC091390.3-201ENST00000426478 338 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC089999.1-201ENST00000460336 374 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC017015.1-201ENST00000477387 286 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 RPL21P13-201ENST00000488305 481 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 RPL7P23-201ENST00000493874 747 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 RNA5SP76-201ENST00000516277 87 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC073657.2-201ENST00000605661 303 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 PLCE1P1-201ENST00000622094 305 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC015726.3-201ENST00000624501 418 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 AC048347.1-201ENST00000624621 427 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 CR392039.4-201ENST00000624968 501 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC112Q8NEF3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 SNORA31-201ENST00000362607 130 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 SNORA38.1-201ENST00000364172 131 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 MIR181B1-201ENST00000385240 110 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 SNORD65-201ENST00000391079 73 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 XKRYP4-201ENST00000414395 483 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 RPF2P1-201ENST00000424137 906 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 AC007563.3-201ENST00000433233 371 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 RPL7P59-201ENST00000447700 943 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 XKRYP5-201ENST00000449659 483 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 RPL7P38-201ENST00000488396 739 ntBASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC112Q8NEF3 AC005951.1-201ENST00000576706 485 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms