Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL3Q8IVW4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 MIR670-201ENST00000390142 98 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 HSFY4P-201ENST00000415994 1181 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 MTND2P21-201ENST00000436242 1042 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 TPTE2P6-202ENST00000445572 1007 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC096992.1-201ENST00000459808 709 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 RPL7P38-201ENST00000488396 739 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 MTCO1P31-201ENST00000506355 492 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 MIR5186-201ENST00000577504 120 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 MIR3922-201ENST00000585192 84 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AL157817.1-201ENST00000614264 790 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 AL079305.1-201ENST00000623159 3008 ntBASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL3Q8IVW4 RAD1P1-201ENST00000231383 813 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP50-201ENST00000363731 107 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC234772.1-201ENST00000377927 937 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RNU6-40P-201ENST00000384254 107 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 NPM1P10-201ENST00000398310 865 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC006960.1-201ENST00000419980 153 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RPS15AP6-201ENST00000420703 385 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 GTF2IP23-201ENST00000423746 351 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC091286.1-201ENST00000431233 461 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 ARL4AP4-201ENST00000434170 518 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 NF1P3-201ENST00000457709 450 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RPL21P13-201ENST00000488305 481 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RPL23AP55-201ENST00000498163 452 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 RN7SKP289-201ENST00000517244 295 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC053481.3-201ENST00000577881 843 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 HMGN2P28-201ENST00000606102 262 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 MIR6864-201ENST00000617935 70 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC091903.1-201ENST00000624322 454 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AL136164.4-201ENST00000625013 2135 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
CDKL3Q8IVW4 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 U3.11-201ENST00000364476 212 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 Z86062.1-201ENST00000406773 777 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 RPL32P35-201ENST00000415214 394 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC244098.2-201ENST00000422068 99 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC104308.1-201ENST00000454621 333 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC091564.1-201ENST00000464563 479 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 TMEM248P1-201ENST00000510579 951 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC005351.1-201ENST00000511152 786 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 POLR2KP1-201ENST00000553226 168 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms