Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC113420.1-201ENST00000507903 571 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 RNU6-488P-201ENST00000515918 99 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC074029.1-201ENST00000552531 1044 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC044913.1-201ENST00000557200 430 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 MTCYBP23-201ENST00000558717 1102 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AL049838.1-201ENST00000563647 981 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 MIR4760-201ENST00000585040 80 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC015726.1-201ENST00000602353 681 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC008739.3-201ENST00000603262 127 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AP005137.2-201ENST00000609238 400 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC012531.5-201ENST00000611375 151 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AL592148.2-201ENST00000612210 372 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AL138478.1-201ENST00000612252 832 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AL391261.4-201ENST00000616012 481 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 FP236240.3-201ENST00000623061 327 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC091905.1-201ENST00000624400 311 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 OR1S1-201ENST00000624470 978 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 AC087821.2-201ENST00000637086 450 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 MTND4P8-201ENST00000514997 1362 ntBASIC3.58□□□□□ -1.84
CCDC71Q8IV32 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC71Q8IV32 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC016716.1-201ENST00000265882 708 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RNA5SP391-201ENST00000363456 119 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 TMSB4XP8-201ENST00000402089 135 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RN7SKP156-201ENST00000410308 342 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RAB9AP3-201ENST00000412737 573 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 TMSB4XP6-201ENST00000415187 135 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 TMSB4XP1-201ENST00000424567 135 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 OR10R1P-201ENST00000441524 1141 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RAB11AP1-201ENST00000442978 646 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 NOTCH2P1-201ENST00000443481 624 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 HMGB3P6-201ENST00000444896 598 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RAB9AP1-201ENST00000449393 573 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RN7SL323P-201ENST00000494712 295 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 SOD1P3-201ENST00000518682 454 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 MTND2P32-201ENST00000521584 1038 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 OR10V3P-201ENST00000525712 725 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 MTCO2P2-201ENST00000591258 225 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC008687.2-201ENST00000597865 520 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AL157392.4-201ENST00000609756 345 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC009237.15-201ENST00000610252 501 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC105227.2-201ENST00000615075 605 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 AC010975.3-201ENST00000618727 978 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC71Q8IV32 MFSD8-245ENST00000641743 948 ntBASIC3.57□□□□□ -1.84
CCDC71Q8IV32 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms