Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GSTM5P1-201ENST00000434751 660 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 GAPDHP25-201ENST00000447061 1001 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 SUMO2P4-201ENST00000504193 276 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 RPS4XP20-201ENST00000505751 772 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 RNU6-566P-201ENST00000516790 107 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 HIGD1AP6-201ENST00000521833 279 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC090502.2-201ENST00000549267 280 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC090312.1-201ENST00000580637 348 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AC141273.2-201ENST00000618989 130 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 AP000432.2-201ENST00000624164 2048 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.97□□□□□ -1.29
RC3H1Q5TC82 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RC3H1Q5TC82 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RC3H1Q5TC82 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RC3H1Q5TC82 AC034229.2-201ENST00000566945 2508 ntBASIC6.96□□□□□ -1.29
RC3H1Q5TC82 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RC3H1Q5TC82 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RC3H1Q5TC82 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RC3H1Q5TC82 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RN7SKP104-201ENST00000362605 328 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNU6-251P-201ENST00000363235 104 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.252-201ENST00000364556 101 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNY1P14-201ENST00000384426 108 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL139397.2-201ENST00000404529 772 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNU2-28P-201ENST00000410457 189 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNU6-954P-201ENST00000411355 107 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL161722.2-201ENST00000434731 981 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 HMGB3P11-201ENST00000440127 604 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 CEACAMP9-201ENST00000442990 513 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 PRPS1P1-201ENST00000445305 876 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AZGP1P2-201ENST00000454506 345 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC126389.1-201ENST00000477436 290 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC079140.5-201ENST00000507882 310 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNU6-408P-201ENST00000515910 100 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 SCARNA24.1-201ENST00000516465 137 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 RNA5SP373-201ENST00000517271 95 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 PMS2P3-207ENST00000529061 717 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC092490.3-201ENST00000545370 572 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC008126.1-201ENST00000549019 480 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 MIR4790-201ENST00000577799 79 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL670379.11-201ENST00000604059 253 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL670379.10-201ENST00000604330 253 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL670379.12-201ENST00000605291 253 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AL670379.9-201ENST00000605428 253 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 AC006157.1-201ENST00000611750 366 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 SAMMSON-210ENST00000641260 1308 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 ZNF734P-201ENST00000419494 1534 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 MTND5P30-201ENST00000452896 1731 ntBASIC6.96□□□□□ -1.3
RC3H1Q5TC82 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
RC3H1Q5TC82 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC073365.1-203ENST00000641055 1992 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 RNU4-48P-201ENST00000365559 182 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.482-201ENST00000384377 111 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 RNU6-310P-201ENST00000384655 107 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 RNU6-952P-201ENST00000391164 108 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 MIR548I2-201ENST00000408348 149 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 RNU4-6P-201ENST00000410804 122 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.95□□□□□ -1.3
RC3H1Q5TC82 RPS3AP41-201ENST00000462701 778 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 CEACAMP10-202ENST00000495431 496 ntBASIC6.95□□□□□ -1.3
RC3H1Q5TC82 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms