Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL355816.1-201ENST00000607951 118 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 CFTRP2-201ENST00000634304 199 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 RPS4XP5-202ENST00000449995 1334 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 AC096644.4-201ENST00000563417 2912 ntBASIC4.36□□□□□ -1.71
PTCH1Q13635 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PTCH1Q13635 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTCH1Q13635 SNORD67-201ENST00000390833 111 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.35□□□□□ -1.71
PTCH1Q13635 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 AC244453.4-201ENST00000419150 388 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 AL138785.1-201ENST00000425821 331 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 RPS24P8-201ENST00000431490 402 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 TXNP1-201ENST00000441872 371 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCH1Q13635 AC133473.1-201ENST00000455173 299 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 RPS4XP13-201ENST00000483219 789 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCH1Q13635 SCARNA20.6-201ENST00000517251 106 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCH1Q13635 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCH1Q13635 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.35□□□□□ -1.71
PTCH1Q13635 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCH1Q13635 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.35□□□□□ -1.71
PTCH1Q13635 CYCSP41-201ENST00000616920 296 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 AC015726.3-201ENST00000624501 418 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.35□□□□□ -1.71
PTCH1Q13635 Z73965.1-201ENST00000623412 2297 ntBASIC4.35□□□□□ -1.71
PTCH1Q13635 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTCH1Q13635 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTCH1Q13635 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCH1Q13635 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCH1Q13635 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.34□□□□□ -1.71
PTCH1Q13635 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PTCH1Q13635 MIR423-201ENST00000362201 94 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 RNU6-317P-201ENST00000384031 107 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 RNU6-185P-201ENST00000384421 107 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 RPS4XP8-201ENST00000402039 771 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCH1Q13635 CBX1P4-201ENST00000439415 457 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.34□□□□□ -1.71
PTCH1Q13635 AC090543.1-201ENST00000492168 485 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 AC108157.1-201ENST00000510511 539 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 RNU6-760P-201ENST00000516078 97 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 AL139174.1-201ENST00000531489 886 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.34□□□□□ -1.71
PTCH1Q13635 AC087241.4-201ENST00000612441 480 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 AC104446.1-201ENST00000613728 1321 ntBASIC4.34□□□□□ -1.71
PTCH1Q13635 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTCH1Q13635 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PTCH1Q13635 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PTCH1Q13635 MIR30E-201ENST00000362104 92 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 AL589655.1-201ENST00000405398 482 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 RNU6-55P-201ENST00000411092 107 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 RNU6-954P-201ENST00000411355 107 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 RAC1P3-201ENST00000416129 580 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCH1Q13635 RPL7P36-201ENST00000444633 681 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 RPL34P26-201ENST00000445636 354 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCH1Q13635 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 TPMTP4-201ENST00000450749 678 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 HMGN2P7-201ENST00000456186 273 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 RNA5SP367-201ENST00000516557 118 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 MIR2276-201ENST00000516886 89 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCH1Q13635 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.33□□□□□ -1.72
PTCH1Q13635 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.33□□□□□ -1.72
PTCH1Q13635 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCH1Q13635 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 AC000123.2-201ENST00000623124 461 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCH1Q13635 AC138393.1-206ENST00000540997 1886 ntBASIC4.33□□□□□ -1.72
PTCH1Q13635 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTCH1Q13635 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PTCH1Q13635 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCH1Q13635 RPL7P25-201ENST00000404151 721 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 RNA5SP31-201ENST00000411144 127 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 ZYG11AP1-201ENST00000430329 837 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 FTH1P1-201ENST00000437933 532 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AL109933.2-201ENST00000452651 260 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 UBL5P3-201ENST00000475112 231 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AC011037.1-201ENST00000483964 558 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 RN7SKP132-201ENST00000516001 208 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AC010306.1-201ENST00000523223 1117 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 MIR4425-201ENST00000580572 84 ntBASIC4.32□□□□□ -1.72
PTCH1Q13635 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCH1Q13635 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms