Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 CASC19-246ENST00000641625 1606 ntBASIC7.5□□□□□ -1.21
ATN1P54259 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 AC122713.2-201ENST00000624942 3335 ntBASIC7.5□□□□□ -1.21
ATN1P54259 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 RPL12P13-201ENST00000310055 497 ntBASIC7.5□□□□□ -1.21
ATN1P54259 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 RNU6-239P-201ENST00000390990 99 ntBASIC7.5□□□□□ -1.21
ATN1P54259 MIR190B-201ENST00000401119 79 ntBASIC7.5□□□□□ -1.21
ATN1P54259 RN7SKP229-201ENST00000410465 302 ntBASIC7.5□□□□□ -1.21
ATN1P54259 RPS15AP6-201ENST00000420703 385 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC7.5□□□□□ -1.21
ATN1P54259 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.5□□□□□ -1.21
ATN1P54259 AC083806.1-201ENST00000468934 316 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC022795.1-201ENST00000473808 480 ntBASIC7.5□□□□□ -1.21
ATN1P54259 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 UBA52P7-201ENST00000486088 380 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC091959.1-201ENST00000495857 238 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.5□□□□□ -1.21
ATN1P54259 AP003327.1-201ENST00000529684 127 ntBASIC7.5□□□□□ -1.21
ATN1P54259 SNORD39.2-201ENST00000579995 76 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.5□□□□□ -1.21
ATN1P54259 AL022394.1-201ENST00000606979 292 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AC009318.2-201ENST00000610917 651 ntBASIC7.5□□□□□ -1.21
ATN1P54259 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.5□□□□□ -1.21
ATN1P54259 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ATN1P54259 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
ATN1P54259 AL592148.3-201ENST00000608771 2646 ntBASIC7.5□□□□□ -1.21
ATN1P54259 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 HSP90AA5P-201ENST00000438353 2192 ntBASIC7.5□□□□□ -1.21
ATN1P54259 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
ATN1P54259 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
ATN1P54259 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
ATN1P54259 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.49□□□□□ -1.21
ATN1P54259 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 AL136981.1-203ENST00000451452 3844 ntBASIC7.49□□□□□ -1.21
ATN1P54259 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.49□□□□□ -1.21
ATN1P54259 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
ATN1P54259 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.49□□□□□ -1.21
ATN1P54259 RN7SKP206-201ENST00000410823 293 ntBASIC7.49□□□□□ -1.21
ATN1P54259 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.49□□□□□ -1.21
ATN1P54259 RPL23AP58-201ENST00000440453 469 ntBASIC7.49□□□□□ -1.21
ATN1P54259 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC7.49□□□□□ -1.21
ATN1P54259 RN7SL254P-201ENST00000460609 284 ntBASIC7.49□□□□□ -1.21
ATN1P54259 RPS27AP9-201ENST00000477681 438 ntBASIC7.49□□□□□ -1.21
ATN1P54259 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC7.49□□□□□ -1.21
ATN1P54259 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC7.49□□□□□ -1.21
ATN1P54259 AL390198.2-201ENST00000510553 222 ntBASIC7.49□□□□□ -1.21
ATN1P54259 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.49□□□□□ -1.21
ATN1P54259 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.49□□□□□ -1.21
ATN1P54259 TRAV32-201ENST00000553993 340 ntBASIC7.49□□□□□ -1.21
ATN1P54259 MIR3614-201ENST00000581261 86 ntBASIC7.49□□□□□ -1.21
ATN1P54259 AC008521.2-201ENST00000591021 259 ntBASIC7.49□□□□□ -1.21
ATN1P54259 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC7.49□□□□□ -1.21
ATN1P54259 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7.49□□□□□ -1.21
ATN1P54259 AL589994.2-201ENST00000621124 579 ntBASIC7.49□□□□□ -1.21
ATN1P54259 SNORA16A-202ENST00000628458 135 ntBASIC7.49□□□□□ -1.21
ATN1P54259 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.49□□□□□ -1.21
ATN1P54259 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.49□□□□□ -1.21
ATN1P54259 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.49□□□□□ -1.21
ATN1P54259 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ATN1P54259 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.49□□□□□ -1.21
ATN1P54259 AC011592.1-201ENST00000624647 3634 ntBASIC7.48□□□□□ -1.21
ATN1P54259 TNFSF15-201ENST00000374044 2789 ntBASIC7.48□□□□□ -1.21
ATN1P54259 ZNF826P-207ENST00000622273 1910 ntBASIC7.48□□□□□ -1.21
ATN1P54259 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ATN1P54259 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.48□□□□□ -1.21
ATN1P54259 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.48□□□□□ -1.21
ATN1P54259 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ATN1P54259 Y_RNA.75-201ENST00000362927 97 ntBASIC7.48□□□□□ -1.21
ATN1P54259 Y_RNA.286-201ENST00000364813 102 ntBASIC7.48□□□□□ -1.21
ATN1P54259 RNU1-84P-201ENST00000365447 164 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms