Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-251P-201ENST00000363235 104 ntBASIC5.9□□□□□ -1.46
USP11P51784 Y_RNA.315-201ENST00000365117 102 ntBASIC5.9□□□□□ -1.46
USP11P51784 RNU6-657P-201ENST00000383904 107 ntBASIC5.9□□□□□ -1.46
USP11P51784 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USP11P51784 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.9□□□□□ -1.46
USP11P51784 ELOCP4-201ENST00000420090 333 ntBASIC5.9□□□□□ -1.46
USP11P51784 NCOR1P3-201ENST00000420479 303 ntBASIC5.9□□□□□ -1.46
USP11P51784 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USP11P51784 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.9□□□□□ -1.46
USP11P51784 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.9□□□□□ -1.46
USP11P51784 AC009238.2-201ENST00000431026 355 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC236972.2-201ENST00000434979 310 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC016691.1-201ENST00000441321 413 ntBASIC5.9□□□□□ -1.46
USP11P51784 NDUFA5P7-201ENST00000452914 242 ntBASIC5.9□□□□□ -1.46
USP11P51784 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.9□□□□□ -1.46
USP11P51784 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.9□□□□□ -1.46
USP11P51784 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.9□□□□□ -1.46
USP11P51784 SNORA40.12-201ENST00000516329 111 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC027369.5-201ENST00000533838 755 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC087241.2-201ENST00000535801 324 ntBASIC5.9□□□□□ -1.46
USP11P51784 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.9□□□□□ -1.46
USP11P51784 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.9□□□□□ -1.46
USP11P51784 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USP11P51784 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
USP11P51784 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.9□□□□□ -1.46
USP11P51784 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.9□□□□□ -1.46
USP11P51784 AC115621.1-201ENST00000604653 858 ntBASIC5.9□□□□□ -1.46
USP11P51784 AC008966.2-201ENST00000606157 453 ntBASIC5.9□□□□□ -1.46
USP11P51784 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.9□□□□□ -1.46
USP11P51784 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.9□□□□□ -1.46
USP11P51784 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.9□□□□□ -1.47
USP11P51784 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
USP11P51784 OR11H5P-202ENST00000641612 1325 ntBASIC5.9□□□□□ -1.47
USP11P51784 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP11P51784 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
USP11P51784 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
USP11P51784 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
USP11P51784 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
USP11P51784 C4BPAP1-201ENST00000415474 1893 ntBASIC5.9□□□□□ -1.47
USP11P51784 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.9□□□□□ -1.47
USP11P51784 AC092376.2-201ENST00000622621 4116 ntBASIC5.89□□□□□ -1.47
USP11P51784 AL121950.1-201ENST00000624993 2077 ntBASIC5.89□□□□□ -1.47
USP11P51784 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USP11P51784 RNF6P1-201ENST00000444889 1784 ntBASIC5.89□□□□□ -1.47
USP11P51784 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
USP11P51784 RNU6-223P-201ENST00000362830 107 ntBASIC5.89□□□□□ -1.47
USP11P51784 RNU6-249P-201ENST00000363016 102 ntBASIC5.89□□□□□ -1.47
USP11P51784 Y_RNA.202-201ENST00000364083 110 ntBASIC5.89□□□□□ -1.47
USP11P51784 Y_RNA.384-201ENST00000383909 102 ntBASIC5.89□□□□□ -1.47
USP11P51784 SNORA32.2-201ENST00000384049 122 ntBASIC5.89□□□□□ -1.47
USP11P51784 RPL23AP32-201ENST00000395315 459 ntBASIC5.89□□□□□ -1.47
USP11P51784 RPL7P25-201ENST00000404151 721 ntBASIC5.89□□□□□ -1.47
USP11P51784 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 RN7SKP126-201ENST00000411143 300 ntBASIC5.89□□□□□ -1.47
USP11P51784 MTCYBP8-201ENST00000422855 651 ntBASIC5.89□□□□□ -1.47
USP11P51784 HMGN2P27-201ENST00000427352 270 ntBASIC5.89□□□□□ -1.47
USP11P51784 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.89□□□□□ -1.47
USP11P51784 IFNA20P-201ENST00000436840 528 ntBASIC5.89□□□□□ -1.47
USP11P51784 RPS15AP9-201ENST00000439856 381 ntBASIC5.89□□□□□ -1.47
USP11P51784 KNOP1P3-201ENST00000446933 426 ntBASIC5.89□□□□□ -1.47
USP11P51784 RNU6-261P-201ENST00000459506 102 ntBASIC5.89□□□□□ -1.47
USP11P51784 AC097484.1-201ENST00000471148 389 ntBASIC5.89□□□□□ -1.47
USP11P51784 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.89□□□□□ -1.47
USP11P51784 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 AC008953.1-201ENST00000497334 318 ntBASIC5.89□□□□□ -1.47
USP11P51784 AC025674.1-201ENST00000507074 324 ntBASIC5.89□□□□□ -1.47
USP11P51784 PCBP2P3-201ENST00000509726 843 ntBASIC5.89□□□□□ -1.47
USP11P51784 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.89□□□□□ -1.47
USP11P51784 EIF3KP3-201ENST00000514461 639 ntBASIC5.89□□□□□ -1.47
USP11P51784 Vault.3-201ENST00000516676 95 ntBASIC5.89□□□□□ -1.47
USP11P51784 Y_RNA.711-201ENST00000516993 102 ntBASIC5.89□□□□□ -1.47
USP11P51784 BTF3P12-201ENST00000519620 469 ntBASIC5.89□□□□□ -1.47
USP11P51784 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 AC090502.2-201ENST00000549267 280 ntBASIC5.89□□□□□ -1.47
USP11P51784 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.89□□□□□ -1.47
USP11P51784 DNAJC8P1-201ENST00000554535 372 ntBASIC5.89□□□□□ -1.47
USP11P51784 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.89□□□□□ -1.47
USP11P51784 AC010525.2-201ENST00000590920 195 ntBASIC5.89□□□□□ -1.47
USP11P51784 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 AC103710.3-201ENST00000608157 948 ntBASIC5.89□□□□□ -1.47
USP11P51784 AL121612.2-201ENST00000612261 482 ntBASIC5.89□□□□□ -1.47
USP11P51784 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.89□□□□□ -1.47
USP11P51784 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 MTND4P35-201ENST00000604257 1375 ntBASIC5.89□□□□□ -1.47
USP11P51784 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.89□□□□□ -1.47
USP11P51784 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.89□□□□□ -1.47
USP11P51784 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP11P51784 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP11P51784 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms