Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MRPS21P7-201ENST00000566937 238 ntBASIC5.44□□□□□ -1.54
CCNFP41002 MIR4505-201ENST00000582238 73 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC011477.5-201ENST00000586571 259 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNFP41002 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 RPL23AP92-201ENST00000603609 255 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC005034.5-201ENST00000604219 466 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL592148.3-201ENST00000608771 2646 ntBASIC5.44□□□□□ -1.54
CCNFP41002 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNFP41002 AC009318.4-201ENST00000620496 486 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL158801.5-201ENST00000623123 465 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC090574.1-201ENST00000623186 233 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AC005858.4-201ENST00000623191 700 ntBASIC5.44□□□□□ -1.54
CCNFP41002 MIR4302-201ENST00000638058 60 ntBASIC5.44□□□□□ -1.54
CCNFP41002 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.44□□□□□ -1.54
CCNFP41002 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNFP41002 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNFP41002 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 PCAT14-202ENST00000627127 3935 ntBASIC5.43□□□□□ -1.54
CCNFP41002 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCNFP41002 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 MIR1-2-201ENST00000384961 85 ntBASIC5.43□□□□□ -1.54
CCNFP41002 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 RN7SKP286-201ENST00000410894 299 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.43□□□□□ -1.54
CCNFP41002 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 UQCRBP1-201ENST00000421129 336 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AC012065.2-201ENST00000421295 375 ntBASIC5.43□□□□□ -1.54
CCNFP41002 FABP7P1-201ENST00000424004 391 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 PSMA6P3-201ENST00000428242 164 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 AL627308.1-201ENST00000435693 821 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 CBWD4P-201ENST00000445695 655 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.43□□□□□ -1.54
CCNFP41002 RNU6-261P-201ENST00000459506 102 ntBASIC5.43□□□□□ -1.54
CCNFP41002 RPS24P16-201ENST00000497294 392 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AC093677.1-201ENST00000514414 678 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNFP41002 MIR4472-2-201ENST00000582069 67 ntBASIC5.43□□□□□ -1.54
CCNFP41002 MIR4512-201ENST00000583257 77 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AC068790.3-201ENST00000602988 553 ntBASIC5.43□□□□□ -1.54
CCNFP41002 AL354950.2-201ENST00000617939 290 ntBASIC5.43□□□□□ -1.54
CCNFP41002 SAMMSON-227ENST00000642114 1199 ntBASIC5.43□□□□□ -1.54
CCNFP41002 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 AL122126.1-201ENST00000546905 1318 ntBASIC5.43□□□□□ -1.54
CCNFP41002 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNFP41002 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNFP41002 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCNFP41002 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNFP41002 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNFP41002 RN7SKP6-201ENST00000364795 319 ntBASIC5.42□□□□□ -1.54
CCNFP41002 SNORD81.2-201ENST00000365153 76 ntBASIC5.42□□□□□ -1.54
CCNFP41002 RNU6-359P-201ENST00000365466 108 ntBASIC5.42□□□□□ -1.54
CCNFP41002 SNORD82-201ENST00000365530 70 ntBASIC5.42□□□□□ -1.54
CCNFP41002 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 SNORA17A-201ENST00000391185 133 ntBASIC5.42□□□□□ -1.54
CCNFP41002 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNFP41002 RN7SKP293-201ENST00000411389 296 ntBASIC5.42□□□□□ -1.54
CCNFP41002 MTCO3P12-201ENST00000416718 547 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNFP41002 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.42□□□□□ -1.54
CCNFP41002 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNFP41002 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 AC140076.1-201ENST00000449897 361 ntBASIC5.42□□□□□ -1.54
CCNFP41002 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNFP41002 RPL32P9-201ENST00000487963 407 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNFP41002 RPL23AP72-201ENST00000492447 435 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.42□□□□□ -1.54
CCNFP41002 AC139783.2-201ENST00000504847 1145 ntBASIC5.42□□□□□ -1.54
CCNFP41002 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms