Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC087808.1-201ENST00000520501 361 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.96□□□□□ -1.62
COL15A1P39059 AC008562.1-201ENST00000521763 330 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.96□□□□□ -1.62
COL15A1P39059 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.96□□□□□ -1.62
COL15A1P39059 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.96□□□□□ -1.62
COL15A1P39059 AC002400.1-201ENST00000569310 726 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 MIR3200-201ENST00000580767 85 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.96□□□□□ -1.62
COL15A1P39059 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.96□□□□□ -1.62
COL15A1P39059 AC009220.3-201ENST00000604318 586 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 ELOCP34-201ENST00000604436 327 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 U3.45-201ENST00000607547 219 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 AL159169.3-201ENST00000608871 561 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 AC068620.4-201ENST00000636730 1182 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 AC007671.2-201ENST00000637344 619 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 AP000776.1-201ENST00000530032 1663 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 AC107027.3-201ENST00000565095 3473 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL15A1P39059 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 RNA5SP52-201ENST00000362448 134 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL15A1P39059 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 PTMAP5-201ENST00000393073 333 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 RNU6-603P-201ENST00000411403 107 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 AL365203.2-201ENST00000423444 196 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 Z74696.2-201ENST00000436514 498 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 MTND4P32-201ENST00000437189 1237 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC005229.2-201ENST00000456995 399 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC015724.1-201ENST00000478577 156 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 RPS3AP43-201ENST00000479743 781 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 AC021146.8-201ENST00000507455 733 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.95□□□□□ -1.62
COL15A1P39059 AC109471.1-201ENST00000511631 612 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 AC090819.1-201ENST00000523800 1111 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.95□□□□□ -1.62
COL15A1P39059 AC090888.1-201ENST00000561335 1141 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.95□□□□□ -1.62
COL15A1P39059 VN1R82P-201ENST00000601481 356 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AL390816.3-201ENST00000604527 1066 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 AC069209.1-201ENST00000619282 651 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 AC068137.4-201ENST00000638485 296 ntBASIC4.95□□□□□ -1.62
COL15A1P39059 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.95□□□□□ -1.62
COL15A1P39059 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL15A1P39059 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.94□□□□□ -1.62
COL15A1P39059 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.94□□□□□ -1.62
COL15A1P39059 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL15A1P39059 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL15A1P39059 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL15A1P39059 SNORD116-1-201ENST00000384335 95 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 MIR491-201ENST00000384877 84 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 MIR34B-201ENST00000385076 84 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 RNU6-272P-201ENST00000411028 104 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC005345.1-201ENST00000431868 217 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 RPS20P1-201ENST00000434853 354 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 YWHAZP7-201ENST00000436906 631 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 RPL37P3-201ENST00000456825 293 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.94□□□□□ -1.62
COL15A1P39059 AC022795.1-201ENST00000473808 480 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 RPL7P18-201ENST00000478965 734 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC048346.1-201ENST00000510247 144 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.94□□□□□ -1.62
COL15A1P39059 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.94□□□□□ -1.62
COL15A1P39059 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL15A1P39059 AC005832.3-201ENST00000537929 631 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.94□□□□□ -1.62
COL15A1P39059 GTF2IP8-201ENST00000560687 584 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC233702.9-201ENST00000581528 203 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AL390838.2-201ENST00000602394 274 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC106791.2-201ENST00000604680 391 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AP004247.3-201ENST00000608682 624 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC009090.3-201ENST00000616553 565 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AC139792.2-201ENST00000624218 587 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 AP003072.4-201ENST00000624580 310 ntBASIC4.94□□□□□ -1.62
COL15A1P39059 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms