Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 AC073343.1-201ENST00000328239 651 ntBASIC6.36□□□□□ -1.39
RFX1P22670 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 Y_RNA.615-201ENST00000410769 117 ntBASIC6.36□□□□□ -1.39
RFX1P22670 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.36□□□□□ -1.39
RFX1P22670 BTF3L4P3-201ENST00000418879 476 ntBASIC6.36□□□□□ -1.39
RFX1P22670 CRIP1P1-201ENST00000427567 185 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AC018644.1-201ENST00000429934 551 ntBASIC6.36□□□□□ -1.39
RFX1P22670 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.36□□□□□ -1.39
RFX1P22670 MRPS21P3-201ENST00000436696 262 ntBASIC6.36□□□□□ -1.39
RFX1P22670 SUMO2P3-201ENST00000438311 288 ntBASIC6.36□□□□□ -1.39
RFX1P22670 HMGB1P18-201ENST00000438801 619 ntBASIC6.36□□□□□ -1.39
RFX1P22670 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 MRPS17P3-201ENST00000465453 385 ntBASIC6.36□□□□□ -1.39
RFX1P22670 RN7SL193P-201ENST00000491708 276 ntBASIC6.36□□□□□ -1.39
RFX1P22670 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.36□□□□□ -1.39
RFX1P22670 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 RN7SKP256-201ENST00000517201 314 ntBASIC6.36□□□□□ -1.39
RFX1P22670 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX1P22670 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 AP005639.2-201ENST00000527592 928 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.36□□□□□ -1.39
RFX1P22670 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX1P22670 SCOCP1-201ENST00000554676 349 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AL121821.2-201ENST00000556081 394 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX1P22670 AC145423.1-201ENST00000605712 336 ntBASIC6.36□□□□□ -1.39
RFX1P22670 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.36□□□□□ -1.39
RFX1P22670 AC093838.1-201ENST00000613014 469 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AL139099.4-201ENST00000614802 114 ntBASIC6.36□□□□□ -1.39
RFX1P22670 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 AL596275.2-204ENST00000641628 552 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AL596275.2-206ENST00000641957 626 ntBASIC6.36□□□□□ -1.39
RFX1P22670 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 GTF2IP4-201ENST00000453092 2054 ntBASIC6.36□□□□□ -1.39
RFX1P22670 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 FAM91A3P-201ENST00000456826 2544 ntBASIC6.36□□□□□ -1.39
RFX1P22670 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFX1P22670 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.36□□□□□ -1.39
RFX1P22670 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RFX1P22670 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.35□□□□□ -1.39
RFX1P22670 AC232271.1-201ENST00000602455 2715 ntBASIC6.35□□□□□ -1.39
RFX1P22670 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.35□□□□□ -1.39
RFX1P22670 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 SELENOWP1-201ENST00000322792 252 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RNU1-19P-201ENST00000363306 165 ntBASIC6.35□□□□□ -1.39
RFX1P22670 Y_RNA.474-201ENST00000384341 102 ntBASIC6.35□□□□□ -1.39
RFX1P22670 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RFX1P22670 SNORD37.1-201ENST00000390968 65 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RNU6-754P-201ENST00000391166 107 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RNA5SP345-201ENST00000410646 108 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 CHEK2P3-201ENST00000416118 248 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.35□□□□□ -1.39
RFX1P22670 ARL5AP1-201ENST00000418991 388 ntBASIC6.35□□□□□ -1.39
RFX1P22670 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.35□□□□□ -1.39
RFX1P22670 GEMIN2P1-201ENST00000454246 752 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RPL36AP13-201ENST00000457490 317 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RNU1-88P-201ENST00000459274 128 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AC004062.1-201ENST00000509926 645 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AC005798.1-201ENST00000513715 387 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.35□□□□□ -1.39
RFX1P22670 MIR2117-201ENST00000516780 80 ntBASIC6.35□□□□□ -1.39
RFX1P22670 RNU6-798P-201ENST00000516912 103 ntBASIC6.35□□□□□ -1.39
RFX1P22670 HMGB1P41-201ENST00000520234 440 ntBASIC6.35□□□□□ -1.39
RFX1P22670 SUMO2P20-201ENST00000520803 283 ntBASIC6.35□□□□□ -1.39
RFX1P22670 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 AC103843.2-201ENST00000530523 682 ntBASIC6.35□□□□□ -1.39
RFX1P22670 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.35□□□□□ -1.39
RFX1P22670 AC126615.2-201ENST00000553003 515 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AL589674.2-201ENST00000604304 337 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AL022345.1-201ENST00000607292 135 ntBASIC6.35□□□□□ -1.39
RFX1P22670 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.35□□□□□ -1.39
RFX1P22670 RNA5SP440-201ENST00000612665 119 ntBASIC6.35□□□□□ -1.39
RFX1P22670 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.35□□□□□ -1.39
RFX1P22670 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RFX1P22670 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RFX1P22670 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RFX1P22670 AC027287.1-201ENST00000553115 1453 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms