Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 WBP1LP3-201ENST00000523033 208 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.72□□□□□ -1.33
COL9A1P20849 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.72□□□□□ -1.33
COL9A1P20849 AC136932.1-201ENST00000574771 208 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL9A1P20849 RNU6-85P-201ENST00000605989 107 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 AP001264.1-201ENST00000620602 703 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.72□□□□□ -1.33
COL9A1P20849 COL6A4P1-202ENST00000487147 4317 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 SDAD1P2-201ENST00000441308 2028 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 AC034111.1-201ENST00000562143 3770 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 AC110716.2-201ENST00000563865 3945 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.72□□□□□ -1.33
COL9A1P20849 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL9A1P20849 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL9A1P20849 CYP2G2P-201ENST00000594920 1485 ntBASIC6.72□□□□□ -1.33
COL9A1P20849 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.72□□□□□ -1.33
COL9A1P20849 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL9A1P20849 AC122713.2-201ENST00000624942 3335 ntBASIC6.71□□□□□ -1.33
COL9A1P20849 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.33
COL9A1P20849 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.71□□□□□ -1.33
COL9A1P20849 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
COL9A1P20849 ZNF299P-201ENST00000406845 1804 ntBASIC6.71□□□□□ -1.33
COL9A1P20849 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
COL9A1P20849 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL9A1P20849 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL9A1P20849 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.33
COL9A1P20849 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL9A1P20849 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 AC104837.1-201ENST00000444644 1587 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.71□□□□□ -1.34
COL9A1P20849 AC093849.1-201ENST00000563631 2209 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RNU4-44P-201ENST00000363050 141 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RNU1-130P-201ENST00000363930 160 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RNU6-933P-201ENST00000384424 107 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 SNORA22C-201ENST00000384614 134 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RNU6-1168P-201ENST00000390831 104 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.71□□□□□ -1.34
COL9A1P20849 AC140479.3-201ENST00000418944 1126 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 CYP4F30P-202ENST00000420048 405 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 MTND3P9-201ENST00000429526 346 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.71□□□□□ -1.34
COL9A1P20849 TPT1P13-201ENST00000449760 499 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 RN7SL727P-201ENST00000482164 296 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.71□□□□□ -1.34
COL9A1P20849 AC010186.2-204ENST00000537668 439 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.71□□□□□ -1.34
COL9A1P20849 CPDP1-201ENST00000579660 283 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.71□□□□□ -1.34
COL9A1P20849 AL121917.1-203ENST00000605534 577 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.71□□□□□ -1.34
COL9A1P20849 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
COL9A1P20849 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 CUBNP3-201ENST00000457461 1784 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.71□□□□□ -1.34
COL9A1P20849 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.71□□□□□ -1.34
COL9A1P20849 MAPK10-377ENST00000642006 2752 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 AC131649.2-201ENST00000624925 4439 ntBASIC6.71□□□□□ -1.34
COL9A1P20849 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL9A1P20849 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL9A1P20849 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.71□□□□□ -1.34
COL9A1P20849 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
COL9A1P20849 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL9A1P20849 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL9A1P20849 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.7□□□□□ -1.34
COL9A1P20849 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 AC009951.1-201ENST00000623674 2614 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL9A1P20849 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL9A1P20849 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL9A1P20849 RNA5SP333-201ENST00000363466 118 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 U3.13-201ENST00000364804 214 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 RNA5SP334-201ENST00000364825 118 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 RNU6-47P-201ENST00000383866 107 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 RNU6-637P-201ENST00000384050 107 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
COL9A1P20849 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.7□□□□□ -1.34
COL9A1P20849 RPL23AP33-201ENST00000442301 452 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 Z95327.1-201ENST00000446082 482 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 RN7SL834P-201ENST00000461450 286 ntBASIC6.7□□□□□ -1.34
COL9A1P20849 AL133445.1-201ENST00000467051 452 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms