Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC008628.1-201ENST00000508663 265 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC104108.1-201ENST00000509930 412 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 RN7SKP277-201ENST00000516895 283 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 PAICSP4-201ENST00000517543 1253 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AF279873.1-201ENST00000523393 313 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AP003717.3-201ENST00000544832 1180 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 EIF5A2P1-201ENST00000564027 460 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC021851.1-201ENST00000608537 1082 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AC105429.2-201ENST00000610567 517 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.02□□□□□ -1.93
HLA-DPB1P04440 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DPB1P04440 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AL122126.1-201ENST00000546905 1318 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 XPOTP1-201ENST00000443317 2398 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 XIAPP3-201ENST00000312918 795 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RNU6-609P-201ENST00000365459 107 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 SNORA70E-201ENST00000384492 135 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 SNORD65C-201ENST00000390962 71 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 Z99755.1-201ENST00000414048 380 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RPL36P19-201ENST00000430744 301 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 HSPD1P21-201ENST00000436541 245 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 GXYLT1P1-201ENST00000446657 490 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 SNORA84-201ENST00000459229 133 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RN7SL330P-201ENST00000469709 307 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AL049830.2-201ENST00000480072 201 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC106707.2-201ENST00000484182 374 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC016065.2-201ENST00000514530 444 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RN7SKP13-201ENST00000515933 244 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RNU6-202P-201ENST00000515998 96 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RN7SKP96-201ENST00000516948 297 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RNU6-334P-201ENST00000517072 102 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 IGKV2D-19-201ENST00000523346 262 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC095057.3-201ENST00000567102 1157 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC023824.3-201ENST00000569003 562 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC006557.5-201ENST00000603126 811 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC091488.1-201ENST00000604239 660 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC006065.5-201ENST00000623427 349 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 USP8P1-201ENST00000494673 3183 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DPB1P04440 MTCO1P4-201ENST00000520516 1409 ntBASIC3.01□□□□□ -1.93
HLA-DPB1P04440 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3□□□□□ -1.93
HLA-DPB1P04440 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-DPB1P04440 DNAJC19P6-201ENST00000401853 280 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 TRIM60P5Y-201ENST00000413946 574 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 PAICSP7-201ENST00000419829 962 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3□□□□□ -1.93
HLA-DPB1P04440 FO393414.1-201ENST00000428697 1184 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC073063.1-201ENST00000434352 607 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AC092170.1-201ENST00000440211 356 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AL929288.2-201ENST00000446368 407 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 Z99127.3-201ENST00000448158 395 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AL096803.2-201ENST00000450032 677 ntBASIC3□□□□□ -1.93
HLA-DPB1P04440 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3□□□□□ -1.93
HLA-DPB1P04440 AC073387.1-201ENST00000453261 709 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms