Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL049779.2-201ENST00000553847 315 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFAP04085 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 AL355812.1-201ENST00000603215 216 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFAP04085 AL008723.3-201ENST00000608926 449 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 7SK.10-201ENST00000621414 298 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 EXOC5P1-201ENST00000510543 1969 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFAP04085 GABPAP-201ENST00000419271 1356 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC022325.1-201ENST00000502748 2199 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFAP04085 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 AC007823.1-201ENST00000569932 1566 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 RNU6-188P-201ENST00000364207 107 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 EIF4E2P1-201ENST00000393781 255 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AL109755.1-201ENST00000401791 649 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MIR1178-201ENST00000408396 91 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 RN7SKP286-201ENST00000410894 299 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 POLHP1-201ENST00000411806 470 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFAP04085 AL121776.1-201ENST00000429337 372 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 FABP5P14-201ENST00000437273 393 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 FTLP8-201ENST00000446770 267 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC020550.1-201ENST00000447385 163 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 RPS27AP1-201ENST00000475545 471 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 AC021146.2-201ENST00000504736 556 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 SCARNA18.1-201ENST00000516330 83 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 RNU6-1046P-201ENST00000516538 107 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDGFAP04085 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFAP04085 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDGFAP04085 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFAP04085 MIR3176-201ENST00000582210 90 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MIR4293-201ENST00000584305 78 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.69□□□□□ -1.5
PDGFAP04085 AC022893.3-201ENST00000607665 437 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MIR6793-201ENST00000612376 63 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AC133104.2-201ENST00000615272 193 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 AL158196.1-201ENST00000616786 434 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MIR7159-201ENST00000620587 66 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 uc_338.22-201ENST00000622722 187 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.69□□□□□ -1.5
PDGFAP04085 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 TPTE2P4-201ENST00000258589 1605 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 AP005432.1-201ENST00000580891 3485 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 MTND5P10-201ENST00000603719 1809 ntBASIC5.69□□□□□ -1.5
PDGFAP04085 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFAP04085 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFAP04085 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.68□□□□□ -1.5
PDGFAP04085 MTND5P1-201ENST00000445440 1375 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AC010624.4-201ENST00000597606 1351 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDGFAP04085 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
PDGFAP04085 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PDGFAP04085 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFAP04085 Y_RNA.28-201ENST00000362554 111 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 Y_RNA.212-201ENST00000364177 102 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 GNG5P2-201ENST00000372054 207 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 RNU6-637P-201ENST00000384050 107 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms