Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.59□□□□□ -1.99
SPTA1P02549 HMGB3P18-201ENST00000406327 590 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 RN7SKP56-201ENST00000410513 331 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.59□□□□□ -1.99
SPTA1P02549 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 RN7SKP283-201ENST00000517197 270 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.59□□□□□ -1.99
SPTA1P02549 DNAJC19P3-201ENST00000594491 331 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
SPTA1P02549 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
SPTA1P02549 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
SPTA1P02549 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SPTA1P02549 RNU6-55P-201ENST00000411092 107 ntBASIC2.59□□□□□ -2
SPTA1P02549 RNU6-954P-201ENST00000411355 107 ntBASIC2.59□□□□□ -2
SPTA1P02549 AC069218.2-201ENST00000411665 344 ntBASIC2.59□□□□□ -2
SPTA1P02549 MRPL50P2-201ENST00000416821 482 ntBASIC2.59□□□□□ -2
SPTA1P02549 PTP4A1P5-201ENST00000420305 455 ntBASIC2.59□□□□□ -2
SPTA1P02549 RPL23AP16-201ENST00000441715 421 ntBASIC2.59□□□□□ -2
SPTA1P02549 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.59□□□□□ -2
SPTA1P02549 HMGB1P48-201ENST00000446155 598 ntBASIC2.59□□□□□ -2
SPTA1P02549 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.59□□□□□ -2
SPTA1P02549 AL392112.1-201ENST00000605115 829 ntBASIC2.59□□□□□ -2
SPTA1P02549 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SPTA1P02549 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.59□□□□□ -2
SPTA1P02549 MIR26A1-201ENST00000362205 77 ntBASIC2.58□□□□□ -2
SPTA1P02549 MIR93-201ENST00000385024 80 ntBASIC2.58□□□□□ -2
SPTA1P02549 AC104297.1-201ENST00000393779 870 ntBASIC2.58□□□□□ -2
SPTA1P02549 UQCRHP3-201ENST00000451503 251 ntBASIC2.58□□□□□ -2
SPTA1P02549 HMGN2P23-201ENST00000456759 269 ntBASIC2.58□□□□□ -2
SPTA1P02549 OR6K1P-201ENST00000456766 971 ntBASIC2.58□□□□□ -2
SPTA1P02549 MYL12AP1-201ENST00000518490 515 ntBASIC2.58□□□□□ -2
SPTA1P02549 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.58□□□□□ -2
SPTA1P02549 AC009063.1-201ENST00000563342 702 ntBASIC2.58□□□□□ -2
SPTA1P02549 AC015871.2-201ENST00000603605 948 ntBASIC2.58□□□□□ -2
SPTA1P02549 LINC00901.1-201ENST00000617252 152 ntBASIC2.58□□□□□ -2
SPTA1P02549 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.58□□□□□ -2
SPTA1P02549 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SPTA1P02549 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.58□□□□□ -2
SPTA1P02549 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SPTA1P02549 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SPTA1P02549 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.58□□□□□ -2
SPTA1P02549 RNA5SP104-201ENST00000410989 118 ntBASIC2.58□□□□□ -2
SPTA1P02549 AC112184.1-201ENST00000505179 312 ntBASIC2.58□□□□□ -2
SPTA1P02549 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.58□□□□□ -2
SPTA1P02549 HNRNPKP5-201ENST00000515300 253 ntBASIC2.58□□□□□ -2
SPTA1P02549 AP001636.2-201ENST00000525517 696 ntBASIC2.58□□□□□ -2
SPTA1P02549 CKS1BP1-201ENST00000555221 240 ntBASIC2.58□□□□□ -2
SPTA1P02549 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SPTA1P02549 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SPTA1P02549 AC118273.1-201ENST00000525324 3006 ntBASIC2.58□□□□□ -2
SPTA1P02549 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
SPTA1P02549 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
SPTA1P02549 RNVU1-3-201ENST00000364313 161 ntBASIC2.57□□□□□ -2
SPTA1P02549 MTND2P11-201ENST00000423638 648 ntBASIC2.57□□□□□ -2
SPTA1P02549 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 OR5G4P-201ENST00000525251 760 ntBASIC2.57□□□□□ -2
SPTA1P02549 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 RPL31P45-201ENST00000419532 356 ntBASIC2.57□□□□□ -2
SPTA1P02549 RPS12P18-201ENST00000442381 270 ntBASIC2.57□□□□□ -2
SPTA1P02549 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.57□□□□□ -2
SPTA1P02549 MTCO3P20-201ENST00000454926 688 ntBASIC2.57□□□□□ -2
SPTA1P02549 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.57□□□□□ -2
SPTA1P02549 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.57□□□□□ -2
SPTA1P02549 HMGB1P50-201ENST00000605814 607 ntBASIC2.57□□□□□ -2
SPTA1P02549 AC009570.1-201ENST00000609599 745 ntBASIC2.57□□□□□ -2
SPTA1P02549 NF1P10-201ENST00000613227 742 ntBASIC2.57□□□□□ -2
SPTA1P02549 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.57□□□□□ -2
SPTA1P02549 HSPA8P1-201ENST00000425843 1833 ntBASIC2.56□□□□□ -2
SPTA1P02549 SNORA70E-201ENST00000384492 135 ntBASIC2.56□□□□□ -2
SPTA1P02549 RNU2-52P-201ENST00000410680 190 ntBASIC2.56□□□□□ -2
SPTA1P02549 RPL7P52-201ENST00000449200 742 ntBASIC2.56□□□□□ -2
SPTA1P02549 AC106872.2-201ENST00000494303 480 ntBASIC2.56□□□□□ -2
SPTA1P02549 RNA5SP148-201ENST00000516527 94 ntBASIC2.56□□□□□ -2
SPTA1P02549 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.56□□□□□ -2
SPTA1P02549 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.56□□□□□ -2
SPTA1P02549 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.56□□□□□ -2
SPTA1P02549 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SPTA1P02549 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
SPTA1P02549 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.56□□□□□ -2
SPTA1P02549 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.56□□□□□ -2
SPTA1P02549 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms