Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A1P02462 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A1P02462 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A1P02462 SNORA68.2-201ENST00000391263 128 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 RPS4XP7-201ENST00000406274 780 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 AMD1P2-201ENST00000412936 992 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 RAC1P3-201ENST00000416129 580 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A1P02462 Y_RNA.638-201ENST00000459374 113 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A1P02462 TRBV12-1-201ENST00000479785 344 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 YWHAEP4-201ENST00000505390 198 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A1P02462 AC006445.2-201ENST00000510061 472 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 AC017037.2-201ENST00000513850 890 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 RNA5SP24-201ENST00000516478 95 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A1P02462 AC128657.1-201ENST00000549459 145 ntBASIC3.23□□□□□ -1.89
COL4A1P02462 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A1P02462 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A1P02462 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A1P02462 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A1P02462 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
COL4A1P02462 ZNF658B-202ENST00000615961 3375 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A1P02462 SNORA3.2-201ENST00000408221 125 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 NPM1P11-201ENST00000417106 855 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 FCF1P1-201ENST00000432690 571 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.22□□□□□ -1.89
COL4A1P02462 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.22□□□□□ -1.89
COL4A1P02462 BX276092.4-201ENST00000452056 248 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 SNRPGP5-201ENST00000456003 220 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A1P02462 AC100870.1-201ENST00000522035 505 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL4A1P02462 AP000916.1-201ENST00000533869 835 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.22□□□□□ -1.89
COL4A1P02462 AC006020.1-201ENST00000420179 1854 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 MAPK10-322ENST00000641485 4530 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
COL4A1P02462 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL4A1P02462 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A1P02462 AC010733.2-201ENST00000589496 5702 ntBASIC3.22□□□□□ -1.89
COL4A1P02462 VDAC1P3-201ENST00000434069 851 ntBASIC3.21□□□□□ -1.9
COL4A1P02462 AC021146.5-201ENST00000503544 545 ntBASIC3.21□□□□□ -1.9
COL4A1P02462 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.21□□□□□ -1.9
COL4A1P02462 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.21□□□□□ -1.9
COL4A1P02462 BDH2P1-201ENST00000602288 736 ntBASIC3.21□□□□□ -1.9
COL4A1P02462 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
COL4A1P02462 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
COL4A1P02462 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A1P02462 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.21□□□□□ -1.9
COL4A1P02462 SNORD114-30-201ENST00000364448 72 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 RN7SKP223-201ENST00000410582 62 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A1P02462 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 AL513124.1-201ENST00000450410 614 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 RPS6P2-201ENST00000454208 705 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.2□□□□□ -1.9
COL4A1P02462 AC112184.1-201ENST00000505179 312 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 RPL7P20-201ENST00000520308 745 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 AC092851.1-201ENST00000535964 478 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 HPRT1P3-201ENST00000539521 576 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 AL451049.1-201ENST00000608672 497 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
COL4A1P02462 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.2□□□□□ -1.9
COL4A1P02462 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.2□□□□□ -1.9
COL4A1P02462 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 MRPL50P4-201ENST00000446432 475 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.2□□□□□ -1.9
COL4A1P02462 OR5H5P-201ENST00000503164 928 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.2□□□□□ -1.9
COL4A1P02462 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.2□□□□□ -1.9
COL4A1P02462 AC010338.1-201ENST00000621823 717 ntBASIC3.2□□□□□ -1.9
COL4A1P02462 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A1P02462 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.2□□□□□ -1.9
COL4A1P02462 MTCO1P22-201ENST00000604619 1360 ntBASIC3.19□□□□□ -1.9
COL4A1P02462 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL4A1P02462 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A1P02462 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A1P02462 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
COL4A1P02462 AC009163.5-201ENST00000575421 637 ntBASIC3.19□□□□□ -1.9
COL4A1P02462 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A1P02462 AC087565.3-202ENST00000642085 1603 ntBASIC3.19□□□□□ -1.9
COL4A1P02462 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms