Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MBD4O95243 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MBD4O95243 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.61□□□□□ -1.67
MBD4O95243 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
MBD4O95243 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.61□□□□□ -1.67
MBD4O95243 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 RNA5SP124-201ENST00000362739 110 ntBASIC4.61□□□□□ -1.67
MBD4O95243 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
MBD4O95243 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
MBD4O95243 U8.11-201ENST00000384699 133 ntBASIC4.61□□□□□ -1.67
MBD4O95243 U8.12-201ENST00000384701 133 ntBASIC4.61□□□□□ -1.67
MBD4O95243 MT-TC-201ENST00000387405 66 ntBASIC4.61□□□□□ -1.67
MBD4O95243 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 AL136310.1-201ENST00000404926 654 ntBASIC4.61□□□□□ -1.67
MBD4O95243 RNU2-28P-201ENST00000410457 189 ntBASIC4.61□□□□□ -1.67
MBD4O95243 LUZP4P1-201ENST00000415420 344 ntBASIC4.61□□□□□ -1.67
MBD4O95243 RAC1P3-201ENST00000416129 580 ntBASIC4.61□□□□□ -1.67
MBD4O95243 GTF2IP23-201ENST00000423746 351 ntBASIC4.61□□□□□ -1.67
MBD4O95243 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.61□□□□□ -1.67
MBD4O95243 USP9YP7-201ENST00000436723 430 ntBASIC4.61□□□□□ -1.67
MBD4O95243 EEF1A1P39-201ENST00000440791 250 ntBASIC4.61□□□□□ -1.67
MBD4O95243 ZNF886P-201ENST00000450781 723 ntBASIC4.61□□□□□ -1.67
MBD4O95243 USP9YP32-201ENST00000452432 430 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 HMGB3P30-201ENST00000457863 606 ntBASIC4.61□□□□□ -1.67
MBD4O95243 U8.18-201ENST00000459285 133 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AP000926.1-201ENST00000479573 241 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
MBD4O95243 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.61□□□□□ -1.67
MBD4O95243 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.61□□□□□ -1.67
MBD4O95243 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 OR7E13P-201ENST00000526052 910 ntBASIC4.61□□□□□ -1.67
MBD4O95243 MTND1P8-201ENST00000571424 950 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 AC025588.3-201ENST00000604182 274 ntBASIC4.61□□□□□ -1.67
MBD4O95243 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 RNU4-5P-201ENST00000607255 135 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.61□□□□□ -1.67
MBD4O95243 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 AC005332.6-201ENST00000613178 446 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AC005344.1-201ENST00000613391 459 ntBASIC4.61□□□□□ -1.67
MBD4O95243 AC023158.2-201ENST00000614876 543 ntBASIC4.61□□□□□ -1.67
MBD4O95243 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.61□□□□□ -1.67
MBD4O95243 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MBD4O95243 AC097504.1-201ENST00000515103 2415 ntBASIC4.61□□□□□ -1.67
MBD4O95243 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.61□□□□□ -1.67
MBD4O95243 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
MBD4O95243 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 MIR506-201ENST00000384998 124 ntBASIC4.6□□□□□ -1.67
MBD4O95243 EIF5P1-201ENST00000400019 1231 ntBASIC4.6□□□□□ -1.67
MBD4O95243 SNORA3.3-201ENST00000408712 125 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 MTND2P16-201ENST00000419987 799 ntBASIC4.6□□□□□ -1.67
MBD4O95243 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 NANOGP5-201ENST00000424456 877 ntBASIC4.6□□□□□ -1.67
MBD4O95243 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 USP9YP24-201ENST00000434374 697 ntBASIC4.6□□□□□ -1.67
MBD4O95243 USP9YP17-201ENST00000444617 696 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AL500522.2-201ENST00000448562 343 ntBASIC4.6□□□□□ -1.67
MBD4O95243 NANOGP10-201ENST00000453325 895 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 GTF2IP9-201ENST00000502460 301 ntBASIC4.6□□□□□ -1.67
MBD4O95243 TRAV31-201ENST00000502780 342 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 RN7SKP116-201ENST00000516902 319 ntBASIC4.6□□□□□ -1.67
MBD4O95243 RNU6-1261P-201ENST00000517194 104 ntBASIC4.6□□□□□ -1.67
MBD4O95243 IGKV2D-36-201ENST00000518643 226 ntBASIC4.6□□□□□ -1.67
MBD4O95243 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 AC007991.1-201ENST00000522680 631 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.6□□□□□ -1.67
MBD4O95243 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.6□□□□□ -1.67
MBD4O95243 AC138915.2-201ENST00000569776 97 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.6□□□□□ -1.67
MBD4O95243 AL355812.1-201ENST00000603215 216 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AL354976.1-201ENST00000613843 387 ntBASIC4.6□□□□□ -1.67
MBD4O95243 AL158163.2-201ENST00000619110 700 ntBASIC4.6□□□□□ -1.67
MBD4O95243 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.6□□□□□ -1.67
MBD4O95243 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MBD4O95243 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 MTND4P10-201ENST00000446199 1363 ntBASIC4.6□□□□□ -1.67
MBD4O95243 ZNF37BP-203ENST00000452306 1352 ntBASIC4.6□□□□□ -1.67
MBD4O95243 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.6□□□□□ -1.67
MBD4O95243 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MBD4O95243 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MBD4O95243 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms