Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CUX2O14529 AC108206.1-201ENST00000570186 4159 ntBASIC5.17□□□□□ -1.58
CUX2O14529 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUX2O14529 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUX2O14529 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CUX2O14529 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.17□□□□□ -1.58
CUX2O14529 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CUX2O14529 RNU6-618P-201ENST00000363518 112 ntBASIC5.17□□□□□ -1.58
CUX2O14529 MIR9-1-201ENST00000385198 89 ntBASIC5.17□□□□□ -1.58
CUX2O14529 AC104297.1-201ENST00000393779 870 ntBASIC5.17□□□□□ -1.58
CUX2O14529 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CUX2O14529 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.17□□□□□ -1.58
CUX2O14529 AL009174.1-201ENST00000426577 416 ntBASIC5.17□□□□□ -1.58
CUX2O14529 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.17□□□□□ -1.58
CUX2O14529 METTL15P1-201ENST00000481421 1045 ntBASIC5.17□□□□□ -1.58
CUX2O14529 AC111000.2-201ENST00000507775 550 ntBASIC5.17□□□□□ -1.58
CUX2O14529 AC147055.1-201ENST00000509261 750 ntBASIC5.17□□□□□ -1.58
CUX2O14529 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.17□□□□□ -1.58
CUX2O14529 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.17□□□□□ -1.58
CUX2O14529 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CUX2O14529 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CUX2O14529 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CUX2O14529 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CUX2O14529 RNU6ATAC37P-201ENST00000408328 131 ntBASIC5.16□□□□□ -1.58
CUX2O14529 RNA5SP31-201ENST00000411144 127 ntBASIC5.16□□□□□ -1.58
CUX2O14529 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.16□□□□□ -1.58
CUX2O14529 OR9N1P-201ENST00000491296 333 ntBASIC5.16□□□□□ -1.58
CUX2O14529 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.16□□□□□ -1.58
CUX2O14529 IGLVIV-53-201ENST00000520107 367 ntBASIC5.16□□□□□ -1.58
CUX2O14529 AC090281.1-201ENST00000523019 276 ntBASIC5.16□□□□□ -1.58
CUX2O14529 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.16□□□□□ -1.58
CUX2O14529 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.16□□□□□ -1.58
CUX2O14529 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.16□□□□□ -1.58
CUX2O14529 AC096947.1-201ENST00000603233 470 ntBASIC5.16□□□□□ -1.58
CUX2O14529 AC025811.1-201ENST00000604312 472 ntBASIC5.16□□□□□ -1.58
CUX2O14529 AC138473.1-201ENST00000605717 526 ntBASIC5.16□□□□□ -1.58
CUX2O14529 AC067838.1-201ENST00000606064 577 ntBASIC5.16□□□□□ -1.58
CUX2O14529 MIR6817-201ENST00000615588 66 ntBASIC5.16□□□□□ -1.58
CUX2O14529 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.16□□□□□ -1.58
CUX2O14529 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.16□□□□□ -1.58
CUX2O14529 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CUX2O14529 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CUX2O14529 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CUX2O14529 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CUX2O14529 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CUX2O14529 RNU6-697P-201ENST00000363348 107 ntBASIC5.15□□□□□ -1.58
CUX2O14529 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CUX2O14529 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CUX2O14529 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CUX2O14529 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.15□□□□□ -1.58
CUX2O14529 AC011242.1-201ENST00000433596 1158 ntBASIC5.15□□□□□ -1.58
CUX2O14529 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CUX2O14529 AL138787.1-202ENST00000437804 898 ntBASIC5.15□□□□□ -1.58
CUX2O14529 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.15□□□□□ -1.58
CUX2O14529 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.15□□□□□ -1.58
CUX2O14529 AC091917.2-201ENST00000505002 744 ntBASIC5.15□□□□□ -1.58
CUX2O14529 AP001636.2-201ENST00000525517 696 ntBASIC5.15□□□□□ -1.58
CUX2O14529 AP003122.3-201ENST00000526316 255 ntBASIC5.15□□□□□ -1.58
CUX2O14529 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.15□□□□□ -1.58
CUX2O14529 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.15□□□□□ -1.58
CUX2O14529 AADACP1-206ENST00000561502 1193 ntBASIC5.15□□□□□ -1.58
CUX2O14529 AL159169.2-201ENST00000610061 1269 ntBASIC5.15□□□□□ -1.58
CUX2O14529 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CUX2O14529 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CUX2O14529 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.15□□□□□ -1.59
CUX2O14529 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CUX2O14529 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CUX2O14529 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
CUX2O14529 Y_RNA.338-201ENST00000365320 114 ntBASIC5.14□□□□□ -1.59
CUX2O14529 OR51A3P-201ENST00000413596 924 ntBASIC5.14□□□□□ -1.59
CUX2O14529 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 AL365396.1-201ENST00000430854 671 ntBASIC5.14□□□□□ -1.59
CUX2O14529 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 AC133473.1-201ENST00000455173 299 ntBASIC5.14□□□□□ -1.59
CUX2O14529 RPL9P32-201ENST00000464118 620 ntBASIC5.14□□□□□ -1.59
CUX2O14529 AC008676.3-201ENST00000521237 435 ntBASIC5.14□□□□□ -1.59
CUX2O14529 OR10D4P-201ENST00000525892 951 ntBASIC5.14□□□□□ -1.59
CUX2O14529 Z82195.1-201ENST00000604558 398 ntBASIC5.14□□□□□ -1.59
CUX2O14529 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CUX2O14529 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.14□□□□□ -1.59
CUX2O14529 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CUX2O14529 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.14□□□□□ -1.59
CUX2O14529 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.14□□□□□ -1.59
CUX2O14529 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 MIR512-1-201ENST00000384913 84 ntBASIC5.13□□□□□ -1.59
CUX2O14529 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.13□□□□□ -1.59
CUX2O14529 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.13□□□□□ -1.59
CUX2O14529 FGF7P3-201ENST00000454645 303 ntBASIC5.13□□□□□ -1.59
CUX2O14529 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.13□□□□□ -1.59
CUX2O14529 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.13□□□□□ -1.59
CUX2O14529 MIR2276-201ENST00000516886 89 ntBASIC5.13□□□□□ -1.59
CUX2O14529 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.13□□□□□ -1.59
CUX2O14529 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CUX2O14529 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.13□□□□□ -1.59
CUX2O14529 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.13□□□□□ -1.59
CUX2O14529 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms