Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 RNY4P16-201ENST00000364768 94 ntBASIC5.81□□□□□ -1.48
SOX1O00570 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 MIR649-201ENST00000384843 97 ntBASIC5.81□□□□□ -1.48
SOX1O00570 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX1O00570 SNORD37.1-201ENST00000390968 65 ntBASIC5.81□□□□□ -1.48
SOX1O00570 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SOX1O00570 HMGB3P7-201ENST00000400214 611 ntBASIC5.81□□□□□ -1.48
SOX1O00570 RNU2-39P-201ENST00000410604 198 ntBASIC5.81□□□□□ -1.48
SOX1O00570 TMEM183AP1-205ENST00000432739 290 ntBASIC5.81□□□□□ -1.48
SOX1O00570 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX1O00570 AC073415.1-201ENST00000449240 153 ntBASIC5.81□□□□□ -1.48
SOX1O00570 RPS23P2-201ENST00000463671 415 ntBASIC5.81□□□□□ -1.48
SOX1O00570 MTND4P17-201ENST00000470444 350 ntBASIC5.81□□□□□ -1.48
SOX1O00570 AC097484.1-201ENST00000471148 389 ntBASIC5.81□□□□□ -1.48
SOX1O00570 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.81□□□□□ -1.48
SOX1O00570 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.81□□□□□ -1.48
SOX1O00570 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX1O00570 AC105384.2-201ENST00000508433 640 ntBASIC5.81□□□□□ -1.48
SOX1O00570 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX1O00570 SCARNA24.1-201ENST00000516465 137 ntBASIC5.81□□□□□ -1.48
SOX1O00570 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.81□□□□□ -1.48
SOX1O00570 OR5BN1P-201ENST00000532955 829 ntBASIC5.81□□□□□ -1.48
SOX1O00570 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.81□□□□□ -1.48
SOX1O00570 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX1O00570 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.81□□□□□ -1.48
SOX1O00570 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX1O00570 AC091042.1-201ENST00000579213 173 ntBASIC5.81□□□□□ -1.48
SOX1O00570 MIR4311-201ENST00000580794 100 ntBASIC5.81□□□□□ -1.48
SOX1O00570 POLR3GP2-201ENST00000588366 668 ntBASIC5.81□□□□□ -1.48
SOX1O00570 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX1O00570 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 AL627230.1-201ENST00000613077 211 ntBASIC5.81□□□□□ -1.48
SOX1O00570 AL591926.8-201ENST00000616876 211 ntBASIC5.81□□□□□ -1.48
SOX1O00570 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 AL713922.2-201ENST00000619384 716 ntBASIC5.81□□□□□ -1.48
SOX1O00570 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX1O00570 AL133216.2-202ENST00000634512 349 ntBASIC5.81□□□□□ -1.48
SOX1O00570 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX1O00570 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 CDC27P2-201ENST00000425026 1922 ntBASIC5.81□□□□□ -1.48
SOX1O00570 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 SDAD1P1-202ENST00000524156 2051 ntBASIC5.81□□□□□ -1.48
SOX1O00570 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SOX1O00570 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX1O00570 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX1O00570 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX1O00570 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SOX1O00570 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 AOX3P-204ENST00000491025 2107 ntBASIC5.8□□□□□ -1.48
SOX1O00570 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 SNORA70.4-201ENST00000365509 134 ntBASIC5.8□□□□□ -1.48
SOX1O00570 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SOX1O00570 RNU6-441P-201ENST00000384545 106 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RNU6-1105P-201ENST00000384774 107 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RNU4-26P-201ENST00000410270 107 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RNU6-193P-201ENST00000410977 107 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.8□□□□□ -1.48
SOX1O00570 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 MTND5P22-201ENST00000458380 195 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RNU1-88P-201ENST00000459274 128 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AC006512.1-201ENST00000468816 291 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AP000893.1-201ENST00000474462 794 ntBASIC5.8□□□□□ -1.48
SOX1O00570 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 AK3P4-201ENST00000504283 583 ntBASIC5.8□□□□□ -1.48
SOX1O00570 TXNP6-201ENST00000510190 310 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AC114797.1-201ENST00000514003 728 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RN7SKP288-201ENST00000516227 268 ntBASIC5.8□□□□□ -1.48
SOX1O00570 SCARNA16.4-201ENST00000516956 187 ntBASIC5.8□□□□□ -1.48
SOX1O00570 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 CYCSP28-201ENST00000534284 321 ntBASIC5.8□□□□□ -1.48
SOX1O00570 LSM6P2-201ENST00000552208 177 ntBASIC5.8□□□□□ -1.48
SOX1O00570 NCAPGP2-201ENST00000557911 754 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.8□□□□□ -1.48
SOX1O00570 AC100830.2-201ENST00000581636 240 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.8□□□□□ -1.48
SOX1O00570 AL513327.3-201ENST00000602618 469 ntBASIC5.8□□□□□ -1.48
SOX1O00570 XIAPP1-201ENST00000603162 600 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms