Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC104785.1-201ENST00000603220 588 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.26□□□□□ -1.73
TCRBV7S3A2A0A539 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 Y_RNA.194-201ENST00000363985 102 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-1243P-201ENST00000364028 107 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 SNORA68.2-201ENST00000391263 128 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 CYB5AP4-201ENST00000396692 399 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AL121834.1-202ENST00000404494 277 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AL023807.1-201ENST00000407932 359 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RNA5SP104-201ENST00000410989 118 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 NUP35P2-201ENST00000416748 943 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 ZNF885P-201ENST00000420174 1098 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RPL30P3-201ENST00000424262 333 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AL512649.1-201ENST00000428997 581 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 ZYG11AP1-201ENST00000430329 837 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 KATNBL1P6-201ENST00000453433 915 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RAD23BP3-201ENST00000454157 1152 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AF213884.1-201ENST00000488102 463 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 MTCO3P7-201ENST00000510008 774 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC110792.2-201ENST00000510278 224 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC107918.3-201ENST00000533272 382 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 OR5AN2P-201ENST00000534535 896 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 RFPL1S-203ENST00000539579 330 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 PSMB7P1-201ENST00000556349 514 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 AC092192.1-201ENST00000633154 1018 ntBASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.25□□□□□ -1.73
TCRBV7S3A2A0A539 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 A2MP1-204ENST00000566278 4130 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-660P-201ENST00000364566 109 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-723P-201ENST00000383973 107 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RPS3AP23-201ENST00000401762 784 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL139128.1-201ENST00000413921 941 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AC119751.6-201ENST00000416712 186 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL590609.2-201ENST00000421430 368 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 AL049610.1-201ENST00000423374 372 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 NANOGP6-201ENST00000429190 847 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RPS3AP54-201ENST00000435535 734 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 TRIM60P18-201ENST00000441518 828 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 CEACAMP9-201ENST00000442990 513 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 COX6CP2-201ENST00000444980 225 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 ZNF114P1-201ENST00000453500 292 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 RPS15AP17-201ENST00000470598 390 ntBASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TCRBV7S3A2A0A539 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms