Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CISHQ9NSE2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 RNU6-761P-201ENST00000384148 107 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 MIR320B1-201ENST00000390209 79 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 SNORA48.5-201ENST00000391143 135 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 U3.42-201ENST00000408746 214 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 RPL35AP12-201ENST00000425362 338 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 USP9YP31-201ENST00000431405 881 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AL162389.1-201ENST00000449233 177 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 RSL24D1P3-201ENST00000449255 495 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 S100A11P2-201ENST00000467589 312 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 MTND5P21-201ENST00000531961 522 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC007566.2-201ENST00000603642 413 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 AC000403.1-201ENST00000613696 3585 ntBASIC3.14□□□□□ -1.91
CISHQ9NSE2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.14□□□□□ -1.91
CISHQ9NSE2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CISHQ9NSE2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CISHQ9NSE2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC000367.1-201ENST00000452711 1766 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AF127577.6-201ENST00000623352 2191 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC240504.1-201ENST00000395709 845 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 RNU2-37P-201ENST00000410695 177 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC022018.1-201ENST00000430685 241 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 HMGB3P8-201ENST00000449709 577 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 HMGB3P30-201ENST00000457863 606 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC078785.3-201ENST00000476607 425 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CISHQ9NSE2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC017100.2-201ENST00000584628 355 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 CYCSP41-201ENST00000616920 296 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC139769.3-201ENST00000618383 175 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 RMST_5.1-201ENST00000618704 126 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 AC092159.4-201ENST00000624944 550 ntBASIC3.13□□□□□ -1.91
CISHQ9NSE2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.13□□□□□ -1.91
CISHQ9NSE2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CISHQ9NSE2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CISHQ9NSE2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CISHQ9NSE2 OR5H2-201ENST00000355273 945 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC013404.1-201ENST00000413068 249 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC008280.1-201ENST00000418851 412 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 RPL31P45-201ENST00000419532 356 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 HMGN2P21-201ENST00000447764 270 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 CCRL1P1-201ENST00000449542 1053 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC112492.1-201ENST00000449607 712 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 CFTRP1-201ENST00000456646 183 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 RPL21P41-201ENST00000459863 264 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 RPL7P23-201ENST00000493874 747 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 RPL5P23-201ENST00000496040 868 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC010374.2-201ENST00000512933 535 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 GTF2IP8-201ENST00000560687 584 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC116563.2-201ENST00000624751 535 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 AP001002.2-201ENST00000625137 386 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CISHQ9NSE2 MIR4278-201ENST00000636094 69 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 U6.98-201ENST00000637157 84 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CISHQ9NSE2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.12□□□□□ -1.91
CISHQ9NSE2 AC096656.1-201ENST00000623826 1364 ntBASIC3.12□□□□□ -1.91
CISHQ9NSE2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CISHQ9NSE2 RNF6P1-201ENST00000444889 1784 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms