Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 HMGB3P14-201ENST00000494195 599 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 LTV1P1-201ENST00000510683 1237 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC007318.2-201ENST00000620999 243 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AF117829.1-206ENST00000621883 3802 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 RNY1P14-201ENST00000384426 108 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 FGF7P8-201ENST00000402994 292 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 HSPE1P8-201ENST00000406997 288 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 DUTP6-201ENST00000425573 462 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC005008.1-201ENST00000456151 612 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC010198.2-201ENST00000550612 259 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC007566.2-201ENST00000603642 413 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 uc_338.1-201ENST00000612113 180 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC007496.3-201ENST00000624987 3443 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 HMGB1P15-201ENST00000453854 435 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 TRBV1-201ENST00000476502 284 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AL359821.1-201ENST00000605519 182 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 AC022149.2-201ENST00000621061 203 ntBASIC2.72□□□□□ -1.97
CHD8Q9HCK8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHD8Q9HCK8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CHD8Q9HCK8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 SNORA36C-201ENST00000384289 132 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 ATF1P1-201ENST00000406040 927 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC011242.1-201ENST00000433596 1158 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 OR4U1P-201ENST00000554958 912 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC015917.1-201ENST00000579654 510 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC096720.1-201ENST00000604441 183 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC093673.2-201ENST00000609674 331 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 DPH3P2-201ENST00000422618 250 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 RPL7L1P1-201ENST00000448259 785 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 RPL31P13-201ENST00000484151 370 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 NRBF2P1-201ENST00000587407 859 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 AC091905.1-201ENST00000624400 311 ntBASIC2.71□□□□□ -1.98
CHD8Q9HCK8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHD8Q9HCK8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 AC092809.1-201ENST00000441469 474 ntBASIC2.7□□□□□ -1.98
CHD8Q9HCK8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
CHD8Q9HCK8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
CHD8Q9HCK8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
CHD8Q9HCK8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
CHD8Q9HCK8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CHD8Q9HCK8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 MIR378A-201ENST00000362177 66 ntBASIC2.69□□□□□ -1.98
CHD8Q9HCK8 RNU6-253P-201ENST00000384730 105 ntBASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms