Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SND1-IT1Q9HBX3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SND1-IT1Q9HBX3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
SND1-IT1Q9HBX3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNU6-353P-201ENST00000364266 108 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 OR1L1-202ENST00000373686 1083 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNU6-354P-201ENST00000383862 107 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNU6-468P-201ENST00000384003 109 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNU6-610P-201ENST00000384264 107 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL024474.1-201ENST00000404655 591 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC099677.1-201ENST00000420575 175 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL390879.2-203ENST00000426943 1121 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL035410.1-201ENST00000427409 427 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL590762.3-201ENST00000436372 640 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 TBCAP1-201ENST00000436520 327 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL592437.1-201ENST00000443781 492 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 SSXP4-201ENST00000451349 245 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 MRPS31P2-201ENST00000451581 518 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 NDUFA5P7-201ENST00000452914 242 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RPS23P7-201ENST00000466210 444 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC087312.1-201ENST00000471411 480 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC012181.1-201ENST00000479895 423 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC105137.1-201ENST00000484355 562 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC110792.1-201ENST00000491826 472 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RAC1P2-201ENST00000511164 579 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC105914.1-201ENST00000511798 226 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 RNA5SP164-201ENST00000516533 110 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC006960.3-201ENST00000561845 705 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 SULT1C2P1-202ENST00000562418 459 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 MIR4666A-201ENST00000580160 79 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 SNORD84-203ENST00000584275 78 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC006329.2-201ENST00000611491 394 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 Mico1.1-201ENST00000611698 204 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AC073530.2-201ENST00000623987 261 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL512506.2-201ENST00000624472 458 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 BX649567.1-201ENST00000642071 1134 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL732372.2-225ENST00000642124 456 ntBASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SND1-IT1Q9HBX3 AL645568.2-201ENST00000432815 1337 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 MIR192-201ENST00000384915 110 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 GSTA8P-201ENST00000404253 637 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 RNU4-6P-201ENST00000410804 122 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AC016397.1-201ENST00000412463 242 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 HMGB3P23-201ENST00000414981 585 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 TAF13P2-201ENST00000416876 286 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 MTND2P19-201ENST00000449129 1012 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 PABPC1P3-201ENST00000469174 459 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AC007686.1-201ENST00000488511 463 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AC011352.3-201ENST00000505162 593 ntBASIC2.45□□□□□ -2.02
SND1-IT1Q9HBX3 AC004062.1-201ENST00000509926 645 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms