Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 FAM157B-203ENST00000639350 358 ntBASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VIPAS39Q9H9C1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RNU6-707P-201ENST00000364647 95 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RNU6-441P-201ENST00000384545 106 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MIR153-1-201ENST00000384914 90 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 ENSAP1-201ENST00000392855 326 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MTCO1P56-201ENST00000401674 224 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RPS4XP9-201ENST00000405151 780 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AL133264.1-201ENST00000407157 562 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AL139098.1-201ENST00000407291 389 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC069218.2-201ENST00000411665 344 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC011933.1-201ENST00000413334 321 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 OR4K6P-201ENST00000416478 897 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RBMY2KP-201ENST00000418221 992 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AL732292.1-201ENST00000426692 226 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 CNOT7P1-201ENST00000429006 852 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 OR51AB1P-201ENST00000429046 620 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 UBE2V1P1-201ENST00000430836 445 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 USP9YP7-201ENST00000436723 430 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 ISCA1P2-201ENST00000438679 421 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 USP9YP32-201ENST00000452432 430 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC116533.1-201ENST00000459748 321 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 GAPDHP36-201ENST00000480688 918 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 SCARNA1-201ENST00000517138 166 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 RN7SKP92-201ENST00000517266 244 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 TRAV37-201ENST00000553906 342 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MTCYBP28-201ENST00000566728 1132 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MIR4666A-201ENST00000580160 79 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MTCO2P2-201ENST00000591258 225 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AL160237.3-201ENST00000604114 1013 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC024940.4-201ENST00000605507 246 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC099676.1-201ENST00000608886 657 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC019193.2-201ENST00000610012 634 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC105227.2-201ENST00000615075 605 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AF001550.2-201ENST00000636643 217 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 AC068620.4-201ENST00000636730 1182 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.72□□□□□ -1.81
VIPAS39Q9H9C1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
VIPAS39Q9H9C1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC073429.2-201ENST00000569694 1444 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 MIR148B-201ENST00000362252 99 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 RNU6-839P-201ENST00000363347 108 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 SNORD56.3-201ENST00000363507 71 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 RNVU1-6-201ENST00000364688 164 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 ZNF602P-201ENST00000405929 924 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 VN1R51P-201ENST00000411675 945 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC093155.1-201ENST00000440164 826 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AL358794.1-201ENST00000445689 381 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 GTF2IP9-201ENST00000502460 301 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC025674.1-201ENST00000507074 324 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC108475.1-201ENST00000507880 950 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 RNA5SP135-201ENST00000517019 125 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 OR7E13P-201ENST00000526052 910 ntBASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VIPAS39Q9H9C1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms