Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 USP9YP31-201ENST00000431405 881 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AL929288.2-201ENST00000446368 407 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC005002.1-201ENST00000447458 540 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 RPL7P52-201ENST00000449200 742 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 SETP14-201ENST00000497538 873 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 HMGB1P22-201ENST00000505315 124 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AL139174.1-201ENST00000531489 886 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AP003385.6-201ENST00000531603 374 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC084824.1-201ENST00000550917 1005 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 DUXAP6-201ENST00000553858 601 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 TGIF1P1-201ENST00000558095 802 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC022149.2-201ENST00000621061 203 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC119674.1-207ENST00000641355 633 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AL589826.1-201ENST00000340697 249 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 SNORD3H-201ENST00000384486 214 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 RN7SKP53-201ENST00000411337 315 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 NEK4P1-201ENST00000433383 879 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 HMGN3P1-201ENST00000453847 193 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 MTCO2P32-201ENST00000514865 403 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 IGJP1-201ENST00000522682 475 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 OR4A45P-201ENST00000529954 901 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC023824.3-201ENST00000569003 562 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC012182.1-201ENST00000570133 895 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AL669831.4-202ENST00000590817 238 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC005972.3-201ENST00000606304 481 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC013468.1-201ENST00000608680 598 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC020923.1-201ENST00000624021 917 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 AC138915.3-201ENST00000562908 1389 ntBASIC3.59□□□□□ -1.83
LRRC40Q9H9A6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
LRRC40Q9H9A6 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.84
LRRC40Q9H9A6 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.84
LRRC40Q9H9A6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LRRC40Q9H9A6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 RPL23AP47-201ENST00000408017 460 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 RNA5SP56-201ENST00000410277 118 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL445183.3-201ENST00000414168 502 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 HSFY1P1-201ENST00000423928 1178 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL009174.1-201ENST00000426577 416 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 RPP40P1-201ENST00000426762 456 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 MTND2P30-201ENST00000456663 382 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 snoU13.24-201ENST00000458998 104 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC010285.1-201ENST00000470580 392 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 MTCO3P44-201ENST00000510977 541 ntBASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC40Q9H9A6 OR8K4P-201ENST00000534608 872 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms