Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RNU6-1151P-201ENST00000384684 107 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RNA5SP171-201ENST00000391071 115 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AP002784.2-201ENST00000397300 549 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RN7SKP111-201ENST00000410349 271 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 HMGN2P21-201ENST00000447764 270 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 PDSS1P2-201ENST00000449397 678 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RBMY2UP-201ENST00000453474 324 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RPS4XP2-201ENST00000458402 793 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RN7SKP13-201ENST00000515933 244 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RN7SKP157-201ENST00000516174 282 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC124293.1-201ENST00000530034 493 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 MIR4504-201ENST00000577413 92 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC008739.3-201ENST00000603262 127 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 BNIP3P4-201ENST00000604946 565 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AL034351.1-201ENST00000605288 668 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC012531.5-201ENST00000611375 151 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC097460.3-201ENST00000623099 442 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 MTND4P8-201ENST00000514997 1362 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 RNU4-27P-201ENST00000410889 139 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 RPL31P2-201ENST00000413849 377 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 ATP5JP1-201ENST00000431631 322 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 TMEM248P1-201ENST00000510579 951 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC104619.4-201ENST00000510773 249 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC027338.1-201ENST00000514840 825 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 SNORA70.19-201ENST00000516717 90 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AL139174.1-201ENST00000531489 886 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AP004242.1-201ENST00000533701 349 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC053481.3-201ENST00000577881 843 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC124283.4-201ENST00000581815 456 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC067852.3-201ENST00000589177 561 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 MIR7851-201ENST00000610611 160 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AC110801.1-201ENST00000623590 212 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCSER1Q9C0I3 AL356274.2-201ENST00000624379 3752 ntBASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 GABPAP-201ENST00000419271 1356 ntBASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCSER1Q9C0I3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 AC009237.5-201ENST00000414271 501 ntBASIC3.9□□□□□ -1.79
CCSER1Q9C0I3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms