Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 USP9YP4-201ENST00000424401 1745 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 RNU6-562P-201ENST00000362731 107 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 MIR558-201ENST00000384920 94 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 RNU2-20P-201ENST00000410425 191 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC108075.1-201ENST00000424692 529 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 USMG5P1-201ENST00000425964 177 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 NANOGP10-201ENST00000453325 895 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 RPL10P17-201ENST00000453852 316 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC078899.1-201ENST00000521432 1185 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 MRPS21P9-201ENST00000571150 257 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 AC003973.3-201ENST00000624863 2822 ntBASIC6.03□□□□□ -1.44
COL25A1Q9BXS0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 BX322650.1-201ENST00000332359 2143 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC114947.2-201ENST00000565748 2125 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 CASC19-228ENST00000641414 1684 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RNU1-43P-201ENST00000365052 165 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 SNORD58.1-201ENST00000391313 66 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RNU6-493P-201ENST00000391321 108 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC004383.1-201ENST00000438135 289 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 NDUFB1P2-201ENST00000449477 176 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 RPL23AP41-201ENST00000484754 458 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC083795.1-201ENST00000491760 320 ntBASIC6.02□□□□□ -1.45
COL25A1Q9BXS0 AC090453.1-201ENST00000495560 436 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms