Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 AC083843.2-201ENST00000568248 6253 ntBASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCHD1Q96NR3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC005294.1-201ENST00000355509 281 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RNA5SP453-201ENST00000362503 119 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RN7SKP185-201ENST00000362813 326 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 Y_RNA.394-201ENST00000383942 103 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RPL7P60-201ENST00000397636 735 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC009804.1-201ENST00000400949 179 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL591416.1-201ENST00000404015 867 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 NPM1P40-201ENST00000412758 733 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 MTCO3P12-201ENST00000416718 547 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 COX6CP15-201ENST00000426313 211 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL031736.2-201ENST00000426573 787 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC138761.5-201ENST00000433967 325 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RPL12P18-201ENST00000437175 325 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RPL5P25-201ENST00000441148 775 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 LINC02210-201ENST00000444561 288 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC079781.2-201ENST00000446424 169 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC105399.1-202ENST00000447303 205 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC104073.1-201ENST00000451988 151 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 CACYBPP2-201ENST00000453625 678 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC233279.1-201ENST00000455300 423 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 PLGLA-201ENST00000465668 449 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RN7SL188P-201ENST00000469842 285 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RPL7P19-201ENST00000469948 618 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL136126.1-201ENST00000473603 402 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RPL32P9-201ENST00000487963 407 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 MTND5P5-201ENST00000503764 376 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 OR4T1P-201ENST00000554933 911 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC019322.1-201ENST00000571869 389 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 MIR3146-201ENST00000580367 79 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC098848.2-201ENST00000588023 330 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC000068.2-201ENST00000608816 460 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC022467.1-201ENST00000614738 749 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC009248.2-201ENST00000619826 254 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 MIR6886-201ENST00000619864 61 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 RMST_7.1-201ENST00000621935 268 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 TPTEP1-208ENST00000636884 213 ntBASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD1Q96NR3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 RIOK3P1-201ENST00000418778 1528 ntBASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 PANDAR-201ENST00000629595 1506 ntBASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 AC092681.1-201ENST00000297369 291 ntBASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 Y_RNA.67-201ENST00000362870 100 ntBASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 RN7SKP162-201ENST00000363605 345 ntBASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCHD1Q96NR3 Y_RNA.431-201ENST00000384086 102 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms